| Annotation |
|---|
| Description | jgi|Araly1|944434|scaffold_700663.1 |
| Sequence |
TTTCTGATTC AAATTTCTGG AAACAATGGG GAGCTTGGGG ACGATGCTGA GATATCCGGA TGATATATAT CCGCTCCTGA AGATGAAACG AGCGATTGAG AAAGCGGAGA AGCAGATCCC CCCTGAGCCA CACTGGGGTT TTTGCTATTC GATGCTCCAC AAGGTTTCTC GAAGCTTTTC TCTCGTTATT CAGCAACTCA ACACCGAGCT TCGTAACGCC GTGTGTGTGT TCTACTTGGT TCTCCGAGCT CTTGATACTG TTGAGGATGA TACAAGCATA CCAACTGATG AAAAGGTTCC CATCCTGATA GCTTTCCACC GGCACTTATA CAACACTGAC TGGCATTATT CATGTGGTAC GAACGAGTAC AAGGTTCTAA TGGACCAATT TCACCATGTT TCTGCAGCCT TTTTGGAACT TGAAAAAGGG TATCAAGAGG CTATCGAGGA AATTACTAGA AGAATGGGTG CAGGGATGGC CAAGTTTATC TGCCAGGAGG TAGAAACTGT TGATGACTAC GATGAATACT GCCACTATGT TGCTGGGCTT GTGGGTTTAG GTTTGTCGAA ACTCTTCCTC GCAGCTGGAT CAGAGGTTTT GACACCAAAT TGGGAGGCGA TTTCCAATTC AATGGGTTTA TTTCTACAGA AAACAAACAT TATCAGAGAT TACCTTGAGG ACATTAATGA GATACCAAAA TCCCGCATGT TTTGGCCTCG CGAGATTTGG GGCAAATATG CTGACAAGCT TGAGGATTTA AAATACGAGG AGAACTCAAC CAAATCCGTA CAGTGCTTGA ATGAAATGGT TACCAATGCG TTGATGCATA TTGAAGATTG CCTGAAATAC ATGGCTGCGT TGCGTGATCC TTCCATATTT CGGTTCTGCG CCATCCCTCA GATCATGGCG ATTGGAACAC TTGCATTATG CTATAACAAT GTACAAGTAT TCAGAGGCGT TGTGAAACTG AGGCGAGGTC TAACTGCTAA AGTCATTGAT CGCACAAAGA CAATGGCTGA TGTCTATGGT GCGTTCTATG ATTTCTCTTG CATGCTGAAG ACAAAGGTTG ACAAGAACGA TCCAAATGCT AGTAAGACAC TAAACCGACT CGAAGCAGTT CAGAAACTCT GCAAAGACAC TGGAGTCCTC CATAACAGAA AATCATATGT TAATGACAAA GGACAACCAA ACAATGTCTT TCTCATAATG GTTGTGATTC TACTGGCGAT AGTCTTTGCA TATCTCAGAG CAACCTGGGT CTGATTGTAT CACCATCATT CAAG |
| Length | 1284 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 2516808.. 2519977 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G34640.1 |
| Description | squalene synthase 1 |
| TAIR curator summary | Encodes squalene synthase, which converts two molecules of farnesyl diphosphate (FPP) into squalene via an intermediate: presqualene diphosphate (PSPP). It is generally thought to be one of the key enzymes of sterol biosynthesis, since it catalyzes the first pathway-specific reaction of the sterol branch of the isoprenoid pathway. |
| Alias | [ERG9][SQS1][squalene synthase 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6.55744 |
Ahg484805 | Spc97 / Spc98 family of spindle pole body (SBP) component |
| 6.7082 |
Ahg478740 | mitogen-activated protein kinase kinase kinase 7 |
| 10.4881 |
Ahg474040 | C3HC zinc finger-like |
| 12.3693 |
Ahg486740 | Carbohydrate-binding-like fold |
| 16.4924 |
Ahg473141 | SecY protein transport family protein |
| 18.6548 |
Ahg934119 | transcription activators |
| 21.9773 |
Ahg470757 | CCCH-type zinc fingerfamily protein with RNA-binding domain |
| 22.3607 |
Ahg495780 | CwfJ-like family protein / zinc finger (CCCH-type) family protein |
| 22.7156 |
Ahg318673 | paralog of ARC6 |
| 25.5147 |
Ahg917653 | type one serine/threonine protein phosphatase 2 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
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