| Annotation |
|---|
| Description | jgi|Araly1|891336|Al_scaffold_0007_3322 |
| Sequence |
GCTGTTTGTC AGTTCGTAAC TAACGTTAAT ATGAGCAATG GAAGGGTGCC TCTCCCAACT AACCGGCCAA ATGGATCAGC TTGTCCCGGG ACAATGCCCT CTACTTCAAC TTCAACACCA CCCTCTCAGA CCCAAACTGT TGTTGTAGAA AACCCCATGT CCGTTGATGA AAGTGGAAAG TTGGTGACCA ATGTTGTTGT TGGTGTGACC ACCGATAAAA AGTAA |
| Length | 225 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 9023682.. 9024180 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G20380.8 |
| Description | LSD1 zinc finger family protein |
| TAIR curator summary | LSD1 monitors a superoxide-dependent signal and negatively regulates a plant cell death pathway. contains zinc-finger motifs. LSD1 negatively regulates a basal defense pathway that can act upstream or independently of both NIM1/NPR1 function and SA accumulation following avirulent or virulent pathogen challenge |
| Alias | [LSD1][LESION SIMULATING DISEASE] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 11.4891 |
Ahg491578 | UDP-N-acetylglucosamine (UAA) transporter family |
| 12.9228 |
Ahg479421 | |
| 23.4947 |
Ahg914474 | Aluminium induced protein with YGL and LRDR motifs |
| 28.6705 |
Ahg481513 | Protein of unknown function (DUF1645) |
| 32.619 |
Ahg486596 | Thioesterase superfamily protein |
| 38.3406 |
Ahg491210 | O-Glycosyl hydrolases family 17 protein |
| 52.45 |
Ahg948263 | VQ motif-containing protein |
| 54.0278 |
Ahg923776 | |
| 54.2218 |
Ahg910892 | Adenine nucleotide alpha hydrolases-like superfamily protein |
| 62.7535 |
Ahg492829 | LSD1 zinc finger family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
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|
| The four seasons |
|
|
| Growth Chamber expression |
|
|