| Annotation |
|---|
| Description | jgi|Araly1|492829|fgenesh2_kg.7__2262__AT4G20380.4 |
| Sequence |
AAAATCGAAA TCTATTGTCC ATTTCCCCAA TTTGCATATC ATCGCTCTAG ATTTCGCTGG TTTTGGATTC GATTCCTCCC CCATCTTCAA TCGTTTTCGG CTTTGAATTG GATTTGGGTT CGGTTCAAAA TCAGCTCTTT TTTGTTTTAT CAGATATGCA GGACCAGCTC GTGTGTCATG GTTGTAGGAA TTTATTGATG TATCCTAGAG GAGCATCTAA TGTGCGTTGT GCGTTATGTA ACACTATCAA CATGGTTCCT CCTCCTCCTC CACCTCACGA CATGGCACAC ATTATATGTG GTGGTTGTAG AACAATGCTT ATGTATACGC GTGGGGCAAG TAGCGTAAGA TGCTCTTGCT GTCAGACTAC GAACCTTGTG CCAGCGCACT CCAATCAGGT TGCCCATGCA CCTTCCAATC AGGTTGCGCA GATCAATTGT GGACATTGTC GGACAACCCT CATGTATCCT TACGGTGCAT CATCTGTTAA ATGCGCTGTT TGTCAATTCG TAACTAACGT TAATATGAGC AATGGAAGGG TACCTCTCCC AACTAACCGG CCAAATGGAT CAGCTTGTCC CGGGACAATG CCCTCTTCAA CACCACCCTC TCAGACCCAA ACCGTTGTTG TAGAAAACCC CATGTCCGTT GATGAAAGTG GAAAGTTGGT GACCAATGTT GTTGTTGGTG TGACCACCGA TAAAAAGTAA CCAAGAATGA GTGAGATTTT AAATATCAAA TCCAAATTCT TCATCTATTC CTGCGTTTGG TTTGTGCATA TTACATACGC GGAAAAACTG TATGTTTATA TATCTCTTGA CTCCTTTTTA ACCTAAGAAA AAGGCTGATC AGAATCTCTT GTTACTGCAA TATTGGGGTT TATTCAAAGT TGAAGACACA AAGGTTTTTG CTCTAAGAAT CTTGCATTCT TTTGCTCCAT GGAACTTGAC CTTCTCTTCT GTTTGTAGAG TTGTAAAACT CCATTGGCC |
| Length | 989 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 9023403.. 9025544 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G20380.8 |
| Description | LSD1 zinc finger family protein |
| TAIR curator summary | LSD1 monitors a superoxide-dependent signal and negatively regulates a plant cell death pathway. contains zinc-finger motifs. LSD1 negatively regulates a basal defense pathway that can act upstream or independently of both NIM1/NPR1 function and SA accumulation following avirulent or virulent pathogen challenge |
| Alias | [LSD1][LESION SIMULATING DISEASE] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 8.83176 |
Ahg481186 | RING/U-box superfamily protein with ARM repeat domain |
| 21.9773 |
Ahg900537 | Disease resistance protein (TIR-NBS-LRR class) family |
| 45.9239 |
Ahg483040 | ortholog of sugar beet HS1 PRO-1 2 |
| 54.4977 |
Ahg942396 | Na+/H+ exchanger 1 |
| 59.7495 |
Ahg947621 | |
| 60.2495 |
Ahg490875 | |
| 62.0322 |
Ahg929127 | PRA1 (Prenylated rab acceptor) family protein |
| 62.7535 |
Ahg891336 | LSD1 zinc finger family protein |
| 74.1755 |
Ahg471462 | cytochrome P450, family 71, subfamily B, polypeptide 29 |
| 87.4071 |
Ahg472692 | Actin cross-linking protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|