| Annotation |
|---|
| Description | jgi|Araly1|891481|Al_scaffold_0007_3467 |
| Sequence |
ATGAATAGTG CAGAGGAAGA GAATAAATCT CTATCCTTGA AAGTTTCAGA GATTTCAGAT GAGATCCAAC AGGCACAGAA CACCATACAA AAACTAATTT CCGAATTGGG AGAGATGAAA GAAAAGTACA AGGAAAAAGA GAGTGAGCAT TCTAGTTCGG TGGAGTTACA TAAGACCCAT GAGAGAGATT CATCGAGTCA TGTGAAAGAA CTAGAAGAGC AAGTGGAATC ATCAAAAAAA TTAGTTGCAG AGTTGAACCA AAGCCTGAAC AATGCAGAGG AAGAGAAAAA ACTACTATCT CAGAAAATAG CAGAACTCTC TAACGAGATT AAAGAGGCAC AAAACACCAT ACAAGAACTC ATATCTGAGT CTGGACAGTT GAAAGAGAGC CACAGTGTAA AGGAGAGAGA TCTTTTCAGC TTGAGGGACA TCCACGAGAC TCATCAAAGA GAATCATCCT CTCGAGTGAG TGAATTAGAA GCTCAACTGG AATCCTCAGA ACAGCGGATC TCAGAGTTGA GTGTGGGTCT GAAGGATGCA GAGGAAGAAA ACAAAGCTAT CTCCTCGAAA AATTTGGAAA CTATGGACAA GCTTGAACAA GCGCAGAACA CGATACAAGA ACTCAGGGAT GAATTAGGAG AGTTGAAAGA CCGTCACAAA GAGAAAGAGA GTGAGCTTTC TAGTTTGGTG GAGGTACACG AGGTATATCA GAGAGATTCA ACAAGCCGAG TGGAAGAATT AGTTGCAATG GTGAAATCAG CAGATCAACA GGTTGCAGAT ATGAAGCAGA GTCTGGACAC TGCAGAGGAA GAGAAAAAAC TGTTATCTCA GAGAATCTTA GAAATCTCTA ATGAGATTCA AGAGGCACAA AAAACCATAG AAGAACACAT GTCTGAGTCT GAACAGTTGA AAGAGAGCCA CGTTGAGAAA GAGAGGGAAC TTACTGGTTT GAGGGACATT CACGAGACTC ATCAAAGAGT ATCATCCACT CGTTTGAGTG AATTAGAAAC TCAACTGAAA TTATCAGAAC AACGGGTCGT AGATTTGAGT GCGAGTCTGA ATGAAGCAGA GGAAGAAAAG AAGTCCATGT CCTCAGAGAT TTTGGAAATT ACGGATGAGC TCAAACAGGC CAAAAGCAAG GTACAAGAAC TTATGACTGA ATTGGCAGAG TCTAAAGATA CACACATACA AAAAGAGAGT GAGCTTTCTA GTTTGGTGGA GGAATCATCC ACTCAGCTAA GAGATTTAGA AGCGCAACTG GAATCATCTG AACACAGGGT TTCGGAATTG AGCGAAAGTC TGAAGGCTGC AGAAGAAGAA AGCAAAACTA TGTCCACGAA AATCTCAGAA ACTTCAGACG AGCTTGAACG GGCACAGATC ATGGTACAGG AACTCACAGC TGATTCGAGC AAACTGAAAG AGCAGCTCGC TGAGAAAGAA GGCGAACTTT TACTTCTTAC AGAGAAGGAC AGCAAATCAC AGGTGCAAAT AAAAGAACTA GAAGCAACAG TAGCGACACT GGAGCTGGAA CTAGAGTCAC TTCGTGCCCG TATAACAGAT CTTGAGACAG AGATTGCAAG CAAGACCACC GTAGTTGAGC AATTGGAAGC GCAAAACAGA GAAATGGTTG CTAGAATCTC AGAACTTGAG AAGACAATGG ACGAGAGAGG AACTGAACTC TCAGCTTTAA CTCAAAAACT TGAGGATAAC GAGAAGCAAT CATCGTCCTC AATTGAGAGT TTGACAGCTG AGATCGATGG CCTACGAGCA GAACTAGATT CAATGTCTGT TGAAGCGTCT TCTGAAACAA TGGCCTTAAC AGAACAGATC AACAATCTGA AGCATGAGCT TGATTCTCTA CAGGTGCAGA AGAGCGAAAC CGAAGCTGAG CTTGAGAGTG AGAAGCAAGA GAAATCAGAA TTGTTGAATC AGATCACCGA TGTTCAGAAA GCATTGGTAG AGCAAGAAGC TGCTTACAAT ACGCTGAAAG AGGAACACAA TCAGATCAAC GAACTGTTCA AAGAAAGTGA AACAACACTA AATAAGCTAA CAGAGGATTA CAAAGAAGCT CAAAGATTGT TGGAAGAGAG AGGTAAGGAA GTAACATCCA GAGATTCTGC AATCGGGGTT CATGAAGAGA CGATGGAGAG TTTACGTAAT GAGCTGGAAA TGAAAGGAGA CGAGATTGAG ACTCTCATGG AGAAGATCAG TAACATCGAG GTTAAGCTAC GTTTGTCGAA CCAGAAACTG AGAGTAACCG AACAGGTACT AACGGAGAAA GAAGAAGCTT TCAGAAAAGA AGAGGCTAAG CACTTAGAGG AGCAAGCATT GCTTGAGAAG AATCTCGCGG TGACACATGA GACATATCGA GGTATGATCA AAGAGATAGC AGATAAAGTG AACATAACAG TAGATGGGTT TCAATCCATG TCGGGAAAAC TCACGGAGAA ACAGGGGAGA TACGAGAAAA CTGTAATGGA GGCATCGAAA ATACTGTGGA CTGCGACGAA TTGGGTGATA GAGAGAAATC ACGAGAAGGA GAAGATGAAG AAAGAGATAG AGAAGAAAGA TGAAGAAATA AAAAGGCTTG GAGGAAAAGT AAGAGAAGAT GAAAAAGAGA AGGAAACGAT GAAAGAGACT TTAATGGGAC TTGGAGAAGA GAAAAGAGAA GCGATAAGGC AGTTATGTGT TTGGATCGAT CACCATAGAA GTCGTTGTGA ATATCTTGAG GATGTTTTGT CTAAGACCGT TGTGGCTCGA GGCCAAAGAA GAGTGTCGCA GCGAGCTTAA |
| Length | 2790 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 20068822.. 20072802 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G41790.1 |
| Description | COP1-interactive protein 1 |
| TAIR curator summary | encodes a protein that physically interacts specifically with the putative coiled-coil region of COP1 in vitro. In hypocotyl and cotyledon protoplasts, it is associated to the cytoskeleton, but not in the root. expression is not regulated by light. |
| Alias | [CIP1][COP1-interactive protein 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6 |
Ahg480822 | heavy metal atpase 4 |
| 7.48331 |
Ahg493941 | |
| 8.12404 |
Ahg929332 | metallothionein 3 |
| 13.784 |
Ahg491400 | gamma vacuolar processing enzyme |
| 14.6629 |
Ahg474809 | HIT zinc finger ;PAPA-1-like conserved region |
| 14.7986 |
Ahg476006 | little nuclei3 |
| 15.1658 |
Ahg482154 | phosphorylcholine cytidylyltransferase |
| 15.4919 |
Ahg495653 | DEK domain-containing chromatin associated protein |
| 16.2788 |
Ahg337666 | cellulose synthase like E1 |
| 17.8326 |
Ahg936095 | alpha/beta-Hydrolases superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|