Detail



ID : Ahg892784

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|892784|Al_scaffold_0006_780
Sequence
ATGAACACCA AGCGCGCCTA CAAGCTCCGT ATCCTTTTCT CTGATTTCAT CTTTAGGGAA TTTGTGGCAC ATTCCGCTGC TGTTAATTGT CTTAAGATTG GGAGGAAGTC CTCAAAGGTT CTCGTAACAG GCGGGGAAGA TCACAAGGTC AATCTGTGGG CTATTGGTAA GCCCAACGCC ATCCTGAGCT TGTATGGGCA CTCGAGTGGG GTTGATTCAG TAACGTTTGA TGCTTCGGAA GGCTTACTAG CAGCAGGAGC TGCTAGTGGT ACAACTAAAC TTTGGGATCT GGAGGAGGCA AAGGACACAA ATCTCAAGAT ATGGGATATA AGAAAGAAGG GCTGCATCCA TACTTACAAG GGTCACACTC GAGGGGTCAA TGTACTCAGA TTCACTCAAG ATGGTCGTTG GACTGTATCT GGAGGAAAAG ATTATGTTGT CAAGGAATTT GTGGCACCTT CTGCCGCTGT TAAGTGTCTT AATATTGGGA GGAAGTCCTC GAGGGTTCTC GTAACTGGCG GGGAAGATCA CAAGGTCAAT CTATGGGCTA TTGGTAAGCC CAACGCCATC CTGAGCTTGT ATGGGCACTC GAGTGGGATT GATTCAGTAA CGTTTGATGC TTCGGAAGGC TTAGTAGCAG CTGGAGCTGC TAGTGGTACA ATTAAACTTT GGGATCTGGA GGAGGCAAAG GTTGTCAGAA CTCTCACTGG TCACAGGTCG AACTGCGTAT CTGTGAATTT TCACCCTTTT GCCTGTGATG GCACTCATTC TCATGAACTA ACCACAAAGC AAACTTCGCA GGAGGTTGAT GGTAAGGACT CGGATCTCAA GGATGAGGGC CCTGTGGAAT GGGTATCCTA CTGGAAACCA AATGTCACAA ATAACCTAGT CGATGACTTT ACTCGCTATC CACAGCATGG TGTACCACCA AACATTGATC CTTACTTACT GGTGGAACCT AGTACAGTAA ACTACTACCC TACAGTTTTT TTCAATGAGT TTTGGCTGCT AAGGGACAAG TTGATTTTAA TCAATGAGAC GGTCTCAGAG CTGCCACTTA ATCTGGAAGT AAGCCCCATA AGCATGACAA AGTGGCAGCT GTTTCAGCAG ATTGATCAGT CTTTCCAGAT TCACCGTAGC TATGGAAGCA TGCTTGATGT TGAATCTGAC GAACTAAAGA GGGTGTTTTT GGAAGGAAAT CCCTATCTGT TGGGCGTCAC AATGTTGTTT CGATGCTTCA TTCTGTATTT GACTTCCTTG CATTCAAAAA ATGCTATTGA ATTACCCGTG ACATTCCCTG CAGATATCCA GTTTTGGAAC AAGAACAAAT CTATGGAAGG ACTGTCTGCG AAAATGGATG GAAGTGTCAC TAGGATATCC TTTTTGATGG GTGGGAACGC CGGAAGTGTC CCGGTGTCTG TGCGTTTGGC TGAAAAGTAT ATCCGACAAA TGAGCAAGAT CAATGGACAG CTAATTCTTT ATGCTTTTAA CATGGTGTTT TCTAAGAAAT TTCTTGGCGG CTGGATGTCA TATCTTGTTC GGGATTTACT TCAGCAACAA GGTGTTCCAC ATGCTCTTCA ACCTGCAATA GTTGAAAGTG TGATTGATGA CAACCTTGAA GGCATTCATA AGAAACTTGG AGCCTGTGCT AAGACGGAGG CACATGGGTA CTCTAGGAGG CAGCCTGTCA TATGGACACC AACTGAAAAC CAAATTTTTG TGAAGGAAAT AGGCAATGCC TTGGAGAAAG ATTTTGATGT TGATGCTATG AGCAACTTGC TGAAATCTTG GAGAGAGTCT AAAGATAAAC TGGCTGCATT ATGCACGGTC ATATGCAACC AATTTATTTT CCAGAAAGAT CCCCCAAGTG TTTTTATGTA TACAAAGAAG ATGGCGTACC TAGATCCTCT CGTGAAAGGA AGAAATGGAG GAATGCTTGA TCTGCTGCAT GCGTTGGAGA AATTCCTGAA AACACACCCT CAACCGAGGG GGCTGGAAGA TTTGTTGCTT GATGGTTTCA TTACAACATG GTATTTAAGC GAGAAGGCGA TTCTGGAATG GTATGAAGAA GGTAGCAAAA GGGATGGAAA TAATGCTCGA CTGTTTGAGT CTGTCAGACA TCTTGTACCT GAAGAGCCAG ATTATGATAT CTGGGCCGAA GATATCTGTA TCATTGAGGG ATCAGAGACA GTTCAAGATT TTTGTGCAGA TGCAGCTCCA GGAAATCCAA GAGACGCGAT AAGACCTTTC TCCTTATTGA AGAAGTCAGG AGGTTACGAG CGCAGCAACG GATTAAGAGT GTTAAAGCCA TCAATGAGCA CAGAGGCAAC CGAGATACCT GACATCCCAT CTTCCATTCC TAATGTTTCT TGGCGATCTC CGCTGAAGAT GGCCATCATC AACTCTGGCA TAGACTGCTT GTCATAA 
Length2427
Protein Sequence
Protein Residue
Map Locationscaffold_6: 3243152.. 3249644
Download Sequence
A.thaliana
AGI-codeAT5G08500.1
DescriptionTransmembrane CLPTM1 family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
7.54983 Ahg900422 BEL1-like homeodomain 5
8.12404 Virus1173
18.7617 Ahg891934
19.105 Virus3786
19.4165 Ahg949018 AP2/B3-like transcriptional factor family protein
20.347 Ahg887422 D-arabinono-1,4-lactone oxidase family protein
30.4138 Ahg895363
50.5173 Ahg331145
62.57 Ahg906250
62.57 Ahg935031
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression