Detail



ID : Ahg893702

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|893702|Al_scaffold_0006_1698
Sequence
ATGGGCTTTT CATTTTCTTC AAACCGTTTT GGTTACTTGA CAATCACATT CTTCCTCGTT ATCTCTTGTC TTCTGTTGGG TTTCTTCACC AATCCTGTTG ATACAAGTGC CCTAAGACCT AAATCCGAGC ATGATTGTAG TGCCCTGAAG CACTTTCATG ACTACAAATC AAAGTGTGCT TACCTCAAAT CAATTGATCC ATGTGCTAGT CAAGGTTTCT TCGATTACCT CTCTTTCCTC TATTGTAATT TCGAAGGATT CCCAATTTTG GGTCAGTTCC TTCTCTTCCT CTGGTTACTT CTCTTGTTCT ATCTACTGGG TCACACAGCT TCTGAATATT TCTGTTCATC TCTTGAAAGT CTCTCAAAGC TGCTTAATTT GTCACCAACT GTTGCTGGCG TGACTCTTTT ATCGCTTGGT AATGGTGCTC CTGATTTGTT TGCAAGTTTG GTCTCTTTCA TGGGAGAATC AAAGGGTACT TATGATGTTG GTCTCAACAC TGTTGTGGGA GGTTCTGGTT TTGTTACCTG TGTTGTTGTT GGGATCATTA GCATTTCGTT GCATAGCAGA CGTGTGAGGA TTGAGAGAGC TGCTTTTATA AGAGACATTT GCTTCTTCTG TGCTGCGATT GGTTCTTTGG CCTTGATTTT GGTCTATGGA AAGATCAATT TTTGGGGTGC TCTTGGGTTC TGTTCGTTGT ATGCTGTCTA TGTTGCGTTT GTGTATCTCT CTTGGAGATT TGGTGGAGAT CAAGGTGCTG AATCTGATCT CGAGTCAATC CATAAGCGTG GTAGTCTTAG TGAACCAATC TTGCAGAGAG ACGGTCTTGA GGAGATCGAA GATGGTGTTG TTAATGGAGA GCATCAGATT GTTGATGATG ATGATCATCA CCAGAGATTT TATTACTGGA AAAGATTGGT CCTTTGGGTT ATCACTCTGC CTCTCAACTT GCCAAGGATA TTGACTATTC CTGTTGTGAG TGAAGCCAAA TGGTCTAAAC CATTAGCTGT TGCCTCTGTC ACATTTGCGC CGGTTCTGTT GTCGTTTCTA TGGAACTGGA AGCGGAAACC GACGAGTTTT GAGGCGGGGA TTGTTTATCT AATCGGGTGT TTGATCGGTA TAGCTCTTGG TTTCATTGCA GGAGCCACTA CGAAGAAATC AACCCCGCCA AAGAAATGGT TGTTGCCTTG GTTAGCAGGA GGATTTGTAA TGAGCATGAC ATGGAGTTAC ATATCAGCGC AAGAGCTAGT AGCGCTTTTG ACCTCACTGG GGTACATTTT CGGGGTAAGC CCTTCGATCT TAGGCCTAAC AGTCCTCNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNCGCTGCA CGATGGGAAC GAAGGAGCTC AAGTGGCTGT ATCAGGATGT TACGCCGGTC CAATCTTCAA TACATTGTTC GCTCTCGGGA TATCGCTTGT GGGATGCGCA TGGGAGGCTT ATCCGTCGAG CATTGTGATT AAGACAGATC CTCGTTTGTT GGAGAGTCTT GGGTTTCTGG TTGTAGGACT GGTTTGGTCG TTCTTGGTTC TGTTTAGTAA CCGTATGAGG CTTGGTGGTG TGATGGGCAT AGGGCTTTTG GTTATTTACT TAGCTTCGTT GTCTCTAAGA ATTATGCAAA CCGTTGGAGA TGCTCACTAA 
Length1680
Protein Sequence
Protein Residue
Map Locationscaffold_6: 7054972.. 7056651
Download Sequence
A.thaliana
AGI-codeAT5G17850.1
DescriptionSodium/calcium exchanger family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
14 Ahg487924 CBL-interacting protein kinase 5
15.4272 Ahg486183 AGAMOUS-like 18
20.6882 Ahg490342 sucrose synthase 3
24.4949 Ahg470369 HXXXD-type acyl-transferase family protein
26.9258 Ahg316165 Proteinase inhibitor, propeptide
27.8209 Ahg316069 Calcium-dependent lipid-binding (CaLB domain) family protein
27.9285 Ahg922994 related to AP2 1
31.1769 Ahg934838 Integrase-type DNA-binding superfamily protein
32.8329 Ahg927522 Mitochondrial substrate carrier family protein
34.8138 Ahg488583 Protein of unknown function (DUF1218)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression