Detail



ID : Ahg893726

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|893726|Al_scaffold_0006_1722
Sequence
ATGGACGAGA TCCAAATTGC TTCACTCCTC AAATCATCTG AGCTTTTTCC GATTCCTCAA AGCGTCAAGC TTTCGTATGG AACAGCTGGG TTCCGAGGCG ATGCAAAGTT GCTTGAATCA ACTGTCTACA GAGTTGGGAT TCTCTCAGCT CTCCGATCGC TCAAGCTTGG ATCAGCCACC GTCGGGCTTA TGATCACAGC TTCGCATAAC AAAGTCTCTG ACAATGGCAT TAAAGTTTCA GATCCATCTG GAGGTATGCT TTCTCAGGAA TGGGAGCCTT TCGCAGATCA GATCGCTAAC GCATCTTCTC CTCAAGAACT CGTTTCATTG ATTAGAGAAT TCATGGAGAA GGAAGAGATT ATGATCGGAG AGAAGAAGAA AAGTGCAGAG GTTTGGTTGG GAAGAGATAC TAGACCTAGT GGTGAATCGC TTCTCCGAGC TGCGGAGATT GGAGTTGGAT CAGTTTTGGG ATCTGTTGCG ATTGACATTG GGATTTTGAC GACTCCGCAA TTGCATTGGA TGGTTAGAGC TAAGAATAAA GGTCTTAAGG CAACTGAGAA TGATTACTTT GAGAATCTCT CTAGTTCATT TAGGTGTTTG ATTGATCTGA TTCCAGTTAG TGGAAATGAT AAGTTAGAGA TTAGCAAATT GCTTGTAGAT GGTGCTAATG GTGTAGGTGG ACAGAAGATT GAGGAGCTAA GAGGGTCTTT GAGTAATCTT GATCTTGAGA TTCGTAACAC AGGGAGAGAT GGTGGTGTGC TTAATGAAGG TGTAGGTGCT GATTTTGTGC AGAAAGAAAA GGTTTTGCCT TTAGGATTTG GGTCTAAGGA TGTTGGGATG AGGTGTGCGA GTTTGGATGG TGATGCAGAT CGATTGGTTT ACTTTTACAT TCCTTCAGAG TCTTCTGATA AGGTTGAGCT ACTAGACGGC GATAAGATTC TGTCTTTGTT TGCTCTCTTC ATCAAAGAGC AGTTAAACAT TCTTGGTGAT GATAAAGAAG GAAAGCAGTC TCGTCTTGGT GTTGTGCAGA CAGCTTATGC GAATGGTGCA TCCACTGATT ACCTAAGGCA GTTGGGTTTA GATGTTGTTT TCGCAAAAAC CGGGGTAAAG CATTTACACG AGAAAGCAGC AGAGTTTGAT ATCGGGATCT ACTTTGAAGC TAATGGCCAC GGGACTATAC TCTTCTCGGA ATCTTTCCTA TCTTGGTTAG TTTCCAAACA AAAGGATCTT ATGGCCAAAG GTCAGGGTGG TTCAGAAGAA CACAAAGCGG TTTCTAGACT AGTTGCGGTG AGTAACCTGA TTAACCAAGC GGTTGGTGAT GCTCTAAGTG GAGTGCTCTT GGTTGAAGTG ATTCTGCAAC ACATGGGATG GTCAATACAG AAGTGGAATG TACTATACAA GGACCTTCCT AGCAGACAGA TCAAGGTCGA AGTTCCAGAC AGAACAGCGG TTGTGACCAC AAGCGAAGAA ACCGAGGCTC TGAGACCTTT GGGGATTCAA GATGCTATTA ATTCTGAAAT CAACAAGTAC CCGCGTGGCA GAGCTTTTAT AAGGCCATCA GGTACAGAAG ATGTGGTGAG AGTATATGCA GAAGCATCCA CTCAAGAAGC TGCTGATTCT TTGGCTAATT CTGTGGCTCA GCTCGTCAAA AGCTTCCTTG GTTCAAGCTA A 
Length1671
Protein Sequence
Protein Residue
Map Locationscaffold_6: 7167689.. 7169351
Download Sequence
A.thaliana
AGI-codeAT5G18070.1
Descriptionphosphoglucosamine mutase-related
TAIR curator summaryencodes a novel protein involved in DNA repair from UV damage. Isolated by functional complementation of E. coli UV-sensitive mutants (UVR genes).
Alias[DRT101][DNA-DAMAGE-REPAIR/TOLERATION 101]
Gene coexpression
MR
MR Locus Description
6 Ahg477184 RNI-like superfamily protein
16.7631 Ahg478277 Lung seven transmembrane receptor family protein
18 Ahg494187 D6 protein kinase like 2
22.3607 Ahg938978 RNA polymerase Rpb8
25.5734 Ahg321719 Protein kinase family protein
27.0555 Ahg477638 APR-like 5
37.229 Ahg901512 phloem protein 2-A15
37.4166 Ahg930774 indole-3-butyric acid response 5
40.3485 Ahg926633 cinnamyl-alcohol dehydrogenase
46.3141 Ahg931973 Secretory carrier membrane protein (SCAMP) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression