Detail



ID : Ahg931973

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|931973|scaffold_304430.1
Sequence
AATCGCTCTC GCTCGGTGCA ATGTCTCGCT ACCAGTCTCC TTCCTTTGAT GACGGCGAGG TTAATCCTTT TGCGAATCCT ACAAGTGTTC CAGCTGCAAC GTCAAAGCTT TCTCCTCTTC CCCCTGAGCC GTACGACCGT GGTGCCACAA TGGATATTCC TCTAGACTCT GGAAAGGATC TGAAAGCTAA GGAGAAGGAA CTCCGGGAAA AAGAGGCTGA ACTGAAGAGG CGGGAGCAGG AAATCAAGCG GAAAGAAGAT GCTATAGCAC AGGCTGGAAT TGTGATAGAA GAGAAAAATT GGCCACCGTT TTTTCCTCTC ATCCATCATG ACATTTCAAA TGAGATACCC ATCCATCTGC AGAGAATCCA ATATGTTGCT TTCACATCAA TGCTGGGTCT TGTGGTGTGC CTGTTATGGA ACATTGTTGC AGTTACCACA GCGTGGATTA AGGGAGAAGG TCCAACAATA TGGTTTCTAG CTATTATCTA TTTCATTTCG GGGGTTCCTG GAGCATATGT TATGTGGTAT CGCCCTCTTT ATCGTGCCAT GAGGACTGAT AGTGCTCTGA AGTTTGGGTG GTTTTTCTTC ACGTATCTGT TTCACATAGC GTTTTGTGTG TTTGCGGCGG TGGCTCCTCC AATTATCTTC AAGGGAAAAT CGTTGACAGG AATATTGCCG GCGATCGACG TATTGAGTGG GAATATCTTG GTCGGGATAT TCTACTTCAT TGGGTTTGGG TTCTTCTGTC TGGAGTCACT CGTGAGCATC TGGGTTATTC AGCAAGTGTA CATGTACTTC AGAGGGAGCG GGAAAGCTGC AGAGATGAAG CAGGAGGCAA CAAGACGAGC AATGATGGCA GCTCTCTGAC CACATACACA CCTTTTAATC C 
Length891
Protein Sequence
Protein Residue
Map Locationscaffold_3: 22690239.. 22692887
Download Sequence
A.thaliana
AGI-codeAT2G20840.1
DescriptionSecretory carrier membrane protein (SCAMP) family protein
TAIR curator summary
Alias[AtSCAMP3][SCAMP3][Secretory carrier membrane protein 3]
Gene coexpression
MR
MR Locus Description
8.48528 Ahg479188
13.1149 Ahg487281 SU(VAR)3-9 homolog 1
13.6382 Ahg488188 IKI3 family protein
14.8997 Ahg323132 nitrilase 2
14.9666 Ahg488963 TRICHOME BIREFRINGENCE-LIKE 5
18.7083 Ahg495674 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
22.2486 Ahg472939 squamosa promoter binding protein-like 10
23.6643 Ahg493620 proteasome alpha subunit A1
25.3772 Ahg471845 proteasome subunit PAB1
26.3818 Ahg480649 high mobility group B4
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression