Detail



ID : Ahg894281

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|894281|Al_scaffold_0006_2277
Sequence
ATGGGAAATA TGAGAAGCTT AGTGAAGATG TTAATGGTGG TTCTGTTTCT TGGATGGATT TTTGTTTGGA TTATGATTTC AACTAATCTT TTCAAAAGCA AGTGGACTCC GAAACTTGCC AAAAATCTCA ATACTACTTA TTTTGGTCCT CAAGGCACGA ATCTTGTGCT TCTCACGGTT CCAATGATGT TCATTGCGGT TTTAAGTTGT GTTTATTTGC ATGTCCAGAA GAAACCAACC CAACCTCAAA GAGAATGGAA GCTAAAAAGG AGAATGGGGA AGGTGATTAT GGTGATGAAT CCATTGGGGA TAGTGACAGC AACAGAGTTA ACTTTTTCTC TATTGTTTGT TGCTCTTTTG GCTTGGTCCC TCTACAATTA TCTCTACATT AGCTATCACA TCCACCTTCA TAACGACGAC AACGCAAAAA TATGGCAGGC GAAGTTTAGG GCTTTCGGCC TGAGAATAGG ATATGTGGGC CACATCTGCT GGGCTTTTTT GTTCTTCCCG GTGACAAGAG CCTCTACGAT TCTGCCAATT TTCGGGTTAA CGTCGGAGTC AAGCATCAAA TATCACATTT GGCTTGGACA TATCTCAAAC TTTCTTTTCC TCGTTCACAC AGTTGTTTTC CTTATCTACT GGGCCATGAT CAATAAGTTG ATGGAGACCT TTGCATGGAA TGCGACATAT GTGCCAAATC TAGCCGGAAC AATAGCGATG GTGATTGGAA TAGCGATGTG GGTAACGAGT TTACCATCCT TTAGACGAAA GAAGTTTGAG ATTTTCTTCT ACACTCACCA TCTCTACGGT GTCTACATAG TCTTCTACGT AATCCATGTC GGTGACTCGT GGTTCTGCAT GATCTTGCCC AACGTCTTTC TCTTTTTCAT CGACCGGTTC TTGAGATTTC TACAATCGAC CAAGAGATCC AGACTTGTTT CTGCTAGGAT CTTACCTTCA GACAACCTCG AACTCACTTT CTCCAAAACC CCAGGGCTAC ATTATACCCC AACAAGCATA TTGTTTCTAC ATATGCCAAG CATTTCCAAG CTGCAATGGC ATCCATTTAC TGTAACTTCG AGCAGTACCT TAGAGAAAGA TACACTAAGC GTTGTAATTA GAAAACAAGG AAGTTGGACT CAAAAGCTTT ACACCCAAAT CTCTTCTTCC ATTGATTCTC TCGAAGTTTC TACTGAAGGT CCTTATGGCC CTAATTCTTT TGATGTCTCG AGGCATAACT CTCTAATACT AGTGAGCGGT GGAAGCGGAA TTACACCCTT CATTTCGGTT ATCAGAGAAC TCATATTTCA GATTCAAAAC CAGAGCACAA AGCTACCAGA TGTTCTTCTT GTTTGTTCCT TCAAAGATTA CCATGATCTT GCGTTTTTAG ACCTAATCTT CCCATTGGAT ATATCAGTCT CTGACATTTC TAGGCTGAAT CTTCGAATTG AGGCCTATGT TACAAGAGAA GACAAGAAGC CCGAGACAAC TGATGATCAC AGACTTCTTC AAACAAAATG GTTCAAACCG CAGCCTCTAG ACTCTCCTAT ATCACCTGTT CTTGGACCCA ACAACTTTCT CTGGCTCGGA GTTGTGATCT TATCATCATT CGTCATGTTT CTCTTGCTCA TAGGGATCGT CACACGTTAC TATATATACC CTGTTGACCA TAACACAGGA TCGATCTACA ATTTCTCGTA TAGAGGGCTT TGGGACATGT TCCTAGGATG TGTGTGCATT TTCATCTCTT CAAGCATAGT TTTCTTATGG CGCAAGAAAC AGAACAAAGA AGGAGATAAG GAAACCAAGA AGCAGGTACA AAGCGTAGAG TTTCAGACGC CCACGTCCTC TCCAGGTTCA TGGTTCCACG GCCACGAGAG AGAGCTCGAG AGCGTTCCCT ATCAATCTAT AGTAAAAGCC ACTTCAGTCC ATTTCGGCTC CAAACCTAAT CTGAAAAAGA TTCTGTTGGA CGCAGAAGGC TCGGAAGATG TTGGGGTGAT GGTTTGCGGA CCAAAAAAGA TGAGACATGA GGTTGCAAAG ATATGTTCAT CTGGTTTGGC TAAGAATCTT CACTTTGAGG CCATTAGTTT CAACTGGTGA 
Length2100
Protein Sequence
Protein Residue
Map Locationscaffold_6: 9768331.. 9771396
Download Sequence
A.thaliana
AGI-codeAT5G23980.1
Descriptionferric reduction oxidase 4
TAIR curator summaryEncodes a ferric chelate reductase that is expressed at low levels in roots,shoots and cotyledons, but not flowers. Its transcription is regulated by FIT1.
Alias[ATFRO4][FRO4][ferric reduction oxidase 4]
Gene coexpression
MR
MR Locus Description
5.65685 Ahg484952 homolog of Medicago truncatula MTN3
9.79796 Ahg481314 FAD-dependent oxidoreductase family protein
12.083 Ahg345494 RING/U-box superfamily protein
12.2882 Ahg947798
13.1909 Ahg933866 TRAF-like family protein
15.6525 Ahg949899 regulatory components of ABA receptor 3
16.6132 Ahg908288 F-box family protein
25.0998 Ahg491946 RING membrane-anchor 2
27.3861 Ahg489974 cysteine-rich RLK (RECEPTOR-like protein kinase) 30
27.7128 Ahg931702 Sec14p-like phosphatidylinositol transfer family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression