Detail



ID : Ahg894470

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|894470|Al_scaffold_0006_2466
Sequence
ATGGACTTTT ATATGCACAA AGAGAAGAAG CGTTTACTTG AAGGTCGCAT CATTTTAGGG TCTGTTTGGA AACGTTATTA TCTTATTCTT GACCTGGTCG AAATCAGCGG GTGGGTTAAA ACGGGAAGGG AGCAAGGAAA AGGGACTTTC GCTTTTCTTG AGGTGAACGA TGGATCCTGC GCAGCGAATC TTCAGGTCAA GGTGGATGCT TGTGTGTCAG ATGTCTCCAA GTTGGTTGCG ACGGGAACTT GTCTGACCGT TGATGGATGT TTGAAGATTC CTCCGGAAGG TAAAGCTACG AAGCAGAAGA TTGAGCTTAG CGCCGAGAAG GTGATTGATG TGGGAACGGT GGATCCGGCT ACGTACCCGA TTCCTAAGAC GAAGCTGACT CTAGAGCATT TGAGAGACTA TACTAATTTT CGTGCAAGGA CCACCACGAT GGCAGCAGTT ACAAGAATCC GACGTAAGAT TACTCTTGAG GCTCACCTTT TCTGTGATGA ACATGATATC TGTCACATTC ACACTCCTAT CATCACAACA AGTGATTGCG AAGGTGCTGG TGAAATGTTC CAAGTCACAA CCTTGATCAA CCAATCTGAC GACAAGTCGC CCACCGAGGC TGACATTGAA GCTGCCAAGC TCATTGTCAA GGAGAAAGGT GAAGCTGTAG CGCAACTCAA AGCTGCCAAA GCAAGCAAGC AAGAGATTAC GGCTTCCGTT GCTCAACTCA CTGAAGCAAA GGAGACTTTA GCTATGGTTG AAGAGAGGTC AAGGCTTAAG CCTGGATTAC CTAAAAAGGA TGGAAAAATT GATTATTCCC AAGATTTCTT TGCTCGTCAA GCTTTCCTCA CAGTTTCTGG TCAATTACAC GCCGAAACCT ATGCTTGCAG TATGGGTGAT GTGTATACAT TTGGCCCCAC TTTCCGGGCA GAGAAGTCTC ACACCTCAAG GCATCTTGCT GAGTTCTGGA TGGTTGAGGT TGAATTAGCT TTTGCCGGTG TAGAGGAGGC TATGAACTGC GCAGAGGCAC TTGTGAAAGA CATTTGCAAT TCGTTGCTTG AAAAGTGTGA TGATGACATG AAACTTATGG CTAAGAATGT CGACAAAGCC TGCATTGACA GGCTACTATT GGTTGCCTCG ACTGGGTTTG GTCGAGTAAC ATACACCGAA GCAATAACGC TACTTGAGAA AGCTGTGGCT CAAGGAAAGA AATTTGAGAA CCAAGTGGAG TGGGGAATCG ACTTAGCATC TGAGCATGAA AGGTCTTTCT TCTTCTATAA TCCTTAA 
Length1287
Protein Sequence
Protein Residue
Map Locationscaffold_6: 10801395.. 10806673
Download Sequence
A.thaliana
AGI-codeAT1G70980.1
DescriptionClass II aminoacyl-tRNA and biotin synthetases superfamily protein
TAIR curator summary
Alias[SYNC3]
Gene coexpression
MR
MR Locus Description
1.73205 Ahg926121 Class II aminoacyl-tRNA and biotin synthetases superfamily protein
5.47723 Ahg942129
13.7477 Ahg483090 Transducin/WD40 repeat-like superfamily protein
18.735 Ahg487223 Galactose oxidase/kelch repeat superfamily protein
19.5959 Ahg477538 Replication protein A, subunit RPA32
20.4939 Ahg358053
20.4939 Ahg896650 endoplasmic reticulum-type calcium-transporting ATPase 3
36.5513 Ahg496249 Pentatricopeptide repeat (PPR) superfamily protein
37.6829 Ahg479874 Ribosomal RNA processing Brix domain protein
39.8623 Ahg480956 methyltransferases
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression