Detail


ID : Ahg896650

Blast(Query):  A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|896650|Al_scaffold_0005_616
Sequence
ATGTTGAAAA AACGTCATGG CTCGAGTGTT GTTGTGGGAC TGAAACGACA TCGGTCGAGT GTTGTGGGAC TGTTGCTACC TCAAGATGCT GTAGAGCTGA TCCTCGAGAG ACTGCCAGTG GAGTCTCTAT TGAAATTCAA GTCTGTTTCC AAGAATTGGA AATCCACAAT CGAGTCCCGG TGTTTCAAGG AACGACAGTT GATCCGTCGC AAGCAATCAC GAGGCCCTGA TGTTCTTTTA GTGCCCCTCA CTTGGTCTTG TGATGGCACA GATGCTGAAA GTATTGCTTT GGGGTCATCC ATTGTTTCTA CCGTCAGGCT GCCTACTTCT TCGGGCAGCA GGATCTGCCA TGGTAGCTGT GACGGTCTAC TATGTCTCTA CTGTGTTTAC ACTCCTAGTG TCGTGGTCAA TCCCGCCACT GGATGGCATC AAACTTTTCC TCTTTCCAAC TTGCAACTGC TCTGCCTCGA CATGTACGAT AAACCCGAAG ACCATGACTT CTTCCCTATG CCTAATCTTG GATTCGGCAG AGACAAATTC ACTGGCACTT ATAAGCCTGT TTGGTTGTAT AACTCATCCC ACTTTGGCCT CCCCAACGCT ACCACTTGTG AAGTTTTCGA TTTTAGCACC AACGCTTGGC GGTACGTTCA CCCTTCTCCT CCTCATCGGA TTAATGATTT CATTAATCCC GTGTATTTAG ATGGGTCACT TCATTGGCTC GCCGAGGGTG AAGAAGATAC CAAGGTTTTG TCTTTCGATC TTCACTCCGA AACCTTTCAT GTCCTCTGCA AAGCTCCCTT TGCCAGTGAT CATTTCCCTA TCAGCCACAA CATGTTCATC CTCGATAATC GCTTGTGCGT CTCTGAGCAA GACTCGTCCA CCCAAGTGAT ATGGTCGTTC CATTCATCTG GCGGCAACAA GAACAAGACA TGGAATAAAT TATGTTCCAT AGATGTCACA AGAACTCGTT CTTGGTTCCT CGATATCAAC TTCCCTCTCG CACCAATTGC AATTTTGGAC AAGAATAAGT TATTGCTTCA AGGTCGCCAT TGCGTGGGAG ACCTGAGAAT AACTGTCCAA CCTGCAAATG CTTCAGAGGG TTTGTGCCAA AGTCAGATGA TGAGTTGGAA TAGCGGAAAC TGGACTCGTA GGTGTAATTT CCAAGCTCTG GTGATGCAGA ACAATGTTAT CAAGGATATC TCAGCAACTG TTCTTGCTCG GATTAATGGA TTTGGATGCT TAGTGTGGAA CCAGGAGCTA TTGGACATGG TTCACTTTAC TGAAGAAGGA GAGCTTCTTT CCATCTGTCT TGCACGTTCT GAGTTAGCGA AGCTGGAGAT TGATTGGCCC AAAATATTCG GATATTTGGT TGGCTCCGAT GTTTCAAGGA ACTCAAAATC AAGACAACGC TGGCAGGGTA TTTGGAACTT TAGGTTACAT GGCTCCAGGT ATTCAATGTC TTGTGCTCTG AACATGTTGA GCAAGCATGA ACGTGCATCA TACTGCAACA ACTGTCGGGA AAACCAATTG AAAAAGGTTG AGCTCTGGGA AAAAGCTCAG GATTTCCTTC TGCACAAGAT AGCTATTTTA AGAGTACCAG TTTCACATAA ACAAGATTCC GATGTTTATG AACGCAAGAC CCCGAAAGGT AGCAGCTGTA ACCGAAGGGA TTTAGAACTT GTCGATATAT CTGCCTGTAA TGTGCCAAAC TACTCGGAAC AGGAGATGTC TTTGAGATAC AGCAGCACAA GCACAGAGAG AGAAGAGCTT TTTTTGGTTG CAGTTTTGTA TTAA
Length1794
Protein Sequence
Protein Residue
Map Locationscaffold_5: 3512834.. 3516176
Download Sequence
A.thaliana
AGI-codeAT1G10130.1
Descriptionendoplasmic reticulum-type calcium-transporting ATPase 3
TAIR curator summaryEncodes a golgi localized P2A-type Ca2+ ATPase involved in Mn nutrition and homeostasis.
Alias[ATECA3][ECA3][ARABIDOPSIS THALIANA ER-TYPE CA2+-ATPASE 3][endoplasmic reticulum-type calcium-transporting ATPase 3]
Gene coexpression
MR
MR Locus Description
4.24264 Ahg925746 Beta-galactosidase related protein
8.66025 Ahg952267 ARF-GAP domain 8
16.3095 Ahg496975 ATP binding microtubule motor family protein
19.799 Ahg921962 Beta-galactosidase related protein
20 Ahg897620
20.4939 Ahg894470 Class II aminoacyl-tRNA and biotin synthetases superfamily protein
23.4521 Ahg900014
24.1868 Ahg311691 glyoxalase 2-4
27.2397 Ahg358053
29.1548 Ahg490730 Class II aminoacyl-tRNA and biotin synthetases superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression