Detail



ID : Ahg895260

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|895260|Al_scaffold_0006_3256
Sequence
AAACAGTCAA ATTCATTTCC TGCCTTAGAA AAGATTTTTA ATCGAAAATC GACGTTTTTT TCAAAAACTC AAAATTTTCG TCGTTTTGTT CTCAGATTTC TTCTACTCTC TTCTTCTTCT TCTTCTTCCA CCGCCTCTGT TGCTTATCTT CTTCTTCTTC CTTCGATTGT TGATTACGTC GGTGGATCTT TGTTCTTTCT GTTGTTGTTT TTCATTGTCA ATGATTGGCT TCTTGCGATT CGATTTTTCC GGCTCCTGTT CTTAATTTTC TCTTGA 
Length276
Protein Sequence
Protein Residue
Map Locationscaffold_6: 19591522.. 19591794
Download Sequence
A.thaliana
AGI-codeAT4G11110.1
DescriptionSPA1-related 2
TAIR curator summaryEncodes a member of the SPA (suppressor of phyA-105) protein family (SPA1-SPA4). SPA proteins contain an N-terminal serine/threonine kinase-like motif followed by a coiled-coil structure and a C-terminal WD-repeat domain. SPA proteins function redundantly in suppressing photomorphogenesis in dark- and light-grown seedlings. SPA2 primarily regulates seedling development in darkness and has little function in light-grown seedlings or adult plants.
Alias[SPA2][SPA1-related 2]
Gene coexpression
MR
MR Locus Description
6.7082 Virus0615
16.9706 Virus0713
17.7482 Ahg952447
20.7846 Ahg322734 Adenine nucleotide alpha hydrolases-like superfamily protein
39.3446 Virus0642
45.2106 Ahg907974
48.8365 Virus1587
51.4393 Ahg952385 radical SAM domain-containing protein / GCN5-related N-acetyltransferase (GNAT) family protein
53.9907 Virus1976
68.5493 Ahg890188 Phosphofructokinase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression