Detail



ID : Ahg896836

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|896836|Al_scaffold_0005_802
Sequence
ATGACTAGCT CCGATCAATC TCCATCGCAC AACGTCTTCG TCTACGGCAG TTTCCAAGAA CCAGCCGTCG TCAAATTGAT CCTCGAATGT GTTCCGGTCA TGGTTTCCGC TCAACTCCAC GGCTATCACT TGTATAGACT TAAAGGTCGT TTGCATCCAT GTATCTCTCC TTCTGAGAAT GGACTCATCA ACGGCAAGAT ACTAAGTGGA TTAACAGATT CTCAGTTAGA GAGTTTAGAT ATGATTGAAG GAACTGAATA TGTCAGGAAG ACTGTTGAAG TTGTTTTGAC TGATACTTTG GAGAAGAAGC AAGTTGAAAC AATTGTATGG GCAAACAAGG ATGATCCTAA TATGTATGGA GAATGGGATT TCGAGGAATG GAAGAGGCTT CATATGGAGA AATTCATAGA GGCGTCGACG AAGTTCATGG AGTGGAAGAA GAATCCGGAT GGGAGAAGTA GGGAAGAGTT TGAGAAGTTT GTATTCGATG ATCCTCCCGC TGCGGCGTGA 
Length510
Protein Sequence
Protein Residue
Map Locationscaffold_5: 4859267.. 4860120
Download Sequence
A.thaliana
AGI-codeAT3G28930.1
DescriptionAIG2-like (avirulence induced gene) family protein
TAIR curator summaryavrRpt2-induced gene that exhibits RPS2- and avrRpt2-dependent induction early after infection with Pseudomonas syringae pv maculicola strain ES4326 carrying avrRpt2
Alias[AIG2][AVRRPT2-INDUCED GENE 2]
Gene coexpression
MR
MR Locus Description
13.6015 Ahg471476 autoinhibited Ca2+/ATPase II
27.4591 Ahg475320 ABC-2 and Plant PDR ABC-type transporter family protein
31.749 Ahg924051 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
32.218 Ahg937652 phosphate transporter 3;2
34.5832 Ahg489590 glutathione synthetase 2
39.0896 Ahg486805 alpha/beta-Hydrolases superfamily protein
40.025 Ahg484948 mitogen-activated protein kinase 3
44.5084 Ahg943990 RAB GTPase homolog H1C
46.6905 Ahg470264 glutathione S-transferase 6
54.7723 Ahg476828 12-oxophytodienoate reductase 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression