Detail



ID : Ahg486805

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|486805|fgenesh2_kg.5__2797__AT3G63010.1
Sequence
ATTTCCTAAT AACCTCTCTC TATCTCTCTC ACCTTTGACT CTCTCTTTCT CTCGTTTCTC TGTACTTGCC TTGCTATCTT CTTTTCTCCA GCTCTCTTTT TTTCTTTTCT GGGTTTGTTT TTAAATCTTC TTCTTCCATC TCCACTGCTT GAGAGAGTCA ATTACTGGTA TGAGTTCTTC GTTTCATTGA AATTATACAC AACAACAAGA TTAACTATGG CTGGTGGAAA CGAAGTCAAC CTTAACGAAT GCAAGAGAAT TGTCCCACTC AACACATGGG TCCTCATTTC CAATTTCAAG CTTGCTTACA AAGTCCTCCG TCGTCCTGAC GGTTCCTTCA ACCGCGACCT CGCCGAGTTT CTTGACCGTA AAGTTCCCGC TAACACTTTC CCTGTCGACG GCGTTTTCTC CTTCGATCAC GTCGACTCTG CCACTAACCT TCTCACCAGA ATCTACCAAC CTGCCTCTCT CCTTGACCTG ACCCGTCTCG GAACCCTCGA GCTTACCAAA CCTCTCAGCA CTACAGAGAT CGTCCCTGTT CTCATTTTCT TCCATGGAGG TAGCTTCACT CATTCCTCGG CCAATAGTGC CATCTACGAC ACTTTCTGCC GACGCCTTGT CACCATTTGC GGTGTTGTTG TTGTCTCTGT TGATTACCGG AGATCGCCTG AGCATCGGTA TCCTTGTGCT TACGACGATG GATGGAATGC TCTCAAATGG GTCAAGTCCA GAGTCTGGCT TCAGAGTGGT AAAGACTCCA ACGTTTATGT TTATTTGGCT GGAGATAGCT CAGGAGGCAA CATAGCTCAC AATGTTGCTG TGAGAGCAAC CAAAGAAGGA GTCAAAGTGT TGGGGAACAT TCTTCTTCAC CCAATGTTTG GTGGACAAGA GAGGACTGAG TCTGAGAAGA GCCTTGATGG CAAATACTTT GTGACTATAC AAGATCGAGA TTGGTATTGG AGGGCTTATT TACCTGAAGG TGAAGATAGA GATCATCCAG CATGTAATCC CTTTGGCCCG AGAGGTCAAA GCCTTAAAGG TGTCAACTTT CCCAAGAGTC TTGTTGTTGT GGCTGGTTTA GATCTTGTTC AGGATTGGCA ATTTGCTTAC GTGGATGGCC TTAAGAAGAA TGGTCTTGAA GTGAATCTTT TGTATTTGAA ACAAGCTACC ATCGGGTTTT ACTTCTTGCC TAACAATGAT CACTTTCATT GTCTTATGGA AGAGTTGAAA AAGTTTGTGC ACCCCATAGA GGATTCTCAA AGCAAGTCAA GTCCTTTGCT TCTTACTCCG TAGGAACAAC AACAACAAGG TCTAGTCATG TTGCTGATAT ATACATAAAG AGAAGAAGAA AGAGGATCGG TTTGTTTTGC CTATATATCT ATGATGGGTT TTTGTACAGT TTCCACAAGT GTTGTCTAGT GTTTAGTAGC GTTTCTTTTG TGTTCCTTGG TCTCCGGAAG CATAATATGG TTGCGCCTGA CGAGAGATCA CTTCGCTTAT CGGCATCTAT CGGTTTAGGG CTATACCGGG ACATTGTACT TTGTTTGCGT ACTAGTATGG GTAGACTTTA ATTAGCTGTA GCTAGAGTAC AGAGGGTAAA TTACAAGACA ACTAACTTGT CTTCAACATG TTGTGAAAAA AACTTATCCT TGGTGTGGAT TTGTATGTTG ATATTAACTT TGCTTTCTCA TGCTATTAAT AGAAATAGTA TGTCTTTGTG GTTGTAGTTT CCCACCTTCT TCTTCTTGTT TTAGTTCATG CATT 
Length1764
Protein Sequence
Protein Residue
Map Locationscaffold_5: 19865839.. 19867960
Download Sequence
A.thaliana
AGI-codeAT3G63010.1
Descriptionalpha/beta-Hydrolases superfamily protein
TAIR curator summaryEncodes a gibberellin (GA) receptor ortholog of the rice GA receptor gene (OsGID1). Has GA-binding activity, showing higher affinity to GA4. Interacts with DELLA proteins in vivo in the presence of GA4.
Alias[ATGID1B][GID1B][GA INSENSITIVE DWARF1B]
Gene coexpression
MR
MR Locus Description
7.93725 Ahg887884 glutamate receptor 2.7
9.38083 Ahg927205 sulfate transporter 1;2
13.4164 Ahg476076 NAC-like, activated by AP3/PI
13.9642 Ahg475091 Flavin-containing monooxygenase family protein
15.4919 Ahg484384 cytochrome P450, family 71, subfamily B, polypeptide 19
18.5203 Ahg931273 UDP-glucosyl transferase 73B5
18.5472 Ahg495588 GDSL-like Lipase/Acylhydrolase superfamily protein
19.1311 Ahg481925 UDP-Glycosyltransferase superfamily protein
24.5357 Ahg489963 Protein of unknown function (DUF793)
32.5423 Ahg489967 Protein of unknown function (DUF604)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression