Detail



ID : Ahg896967

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|896967|Al_scaffold_0005_933
Sequence
ATGACAATTG GAGATGTTGC TCCAATTCCA AGGAGGAACA GTTCTTGCGC TAATGAAATT GTTGCTCCGT TATTACCAGA GTGTCATGGA GATGAAGTTG CTTATGATGA ATTCAATGGA GCTTCTTTTA GTGGCGCGGT TTTTAATCTC GCTACGACTA TAATTGGTGC TGGTATCATG GCTTTGCCGG CTACGATGAA GATTCTTGGA CTTGGACTTG GAATCACTAT GATTGTTGTT ATGGCTTTCT TGACTGATGC ATCGATTGAG TTCTTGCTTA GGTTTAGTAA AGCTGGGAAG AATCGATCTT ACGGTGGTTT AATGGGTGGT TCTTTTGGTA ATCCCGGAAG GATTTTGCTT CAAGTCGCGG TTTTCGTTAA CAACATCGGT GTTTTGATTG TTTACATGAT CATCATAGGT GATGTGTTGG CTGGAAAGAC GGAAGATGGA ATCCATCATT TCGGTGTTCT TGAAGGATGG TTCGGTCACC ATTGGTGGAA CGGAAGAGCT GCTATTCTTC TTATTACAAC TCTTGGTGTG TTTGCTCCAT TAGCTTGCTT CAAGCGAATT GATTCTTTGA AATTTACATC TGCCTTATCC GTGGCTCTGG CGGTTGTGTT TCTCATTATT ACAGCGGGAA TTTCGATTAT GAAGTTGATC AGTGGCGGTG TGGCGATGCC AAGATTGCTA CCAGATGTTA CCGACTTAAC ATCTTTCTGG AATCTCTTCA CAGTTGTACC CGTTCTTGTC ACAGCATTCA TTTGCCATTA CAATGTTCAC AGCATACAGA ACGAGCTCGA AGACGCCTCT CAGATAAGAC CTGTTGTCCG ATCAGCACTT ATGCTCTGCT CATCTGTTTA CATAATGACA AGCATTTTCG GGTTCCTCTT GTTTGGTGAT GATACTCTTG ATGATGTCCT TGCAAACTTT GACACCGACC TTGGAATCCC TTTTGGTTCT ATCCTTAATG ATGCGGTTCG AGTTAGCTAC GCACTTCATC TGATGCTCGT GTTCCCAATT GTTTTCTACC CTCTGCGGAT TAACATTGAC GGGCTCTTGT TCCCTTCCGC CCGATCATTA TCTACCTCAA ATGTGAGGTT CGGTTGCCTC ACTGCCGGTC TCATCTCTGT AGTCTTCTTG GGTGCAAACT TCATCCCGAG CATTTGGGAT GCTTTCCAAT TCACTGGAGC AACTGCCGCT GTTTGTCTCG GCTTCATCTT CCCCGCGTCT ATTATACTAA AGGATCGGCA TGGCAAAGCA ACAAACAGGG ACACAACCTT AGCCATTTTC ATGATCGTTC TTGCGGTATT GTCCAATGCA ATCGCCATTT ACAGCGATGC CTATGCACTA TTCAAGAGGA ACGCGCCTCG TGAGTAA 
Length1377
Protein Sequence
Protein Residue
Map Locationscaffold_5: 6246245.. 6247993
Download Sequence
A.thaliana
AGI-codeAT3G30390.1
DescriptionTransmembrane amino acid transporter family protein
TAIR curator summaryEncodes a putative amino acid transporter.
Alias
Gene coexpression
MR
MR Locus Description
20.2731 Ahg489979 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
23.0217 Ahg471818
25.2982 Ahg485494 strictosidine synthase-like 4
43.6348 Ahg478165 Protein of unknown function (DUF3411)
44.1928 Ahg908800 Protease-associated (PA) RING/U-box zinc finger family protein
44.4972 Ahg937016 DNAJ homologue 3
50.6261 Ahg944406 PLC-like phosphodiesterases superfamily protein
53.1037 Ahg478882 cytochrome P450, family 72, subfamily A, polypeptide 15
57.9137 Ahg481921 ubiquitin-activating enzyme 1
58.9915 Ahg478733 evolutionarily conserved C-terminal region 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression