Detail



ID : Ahg908800

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|908800|Al_scaffold_0002_1881
Sequence
ATGAATCGTG CTTTGGTCCT ACTTTTATAC GTTTATACTG TTTCTTGTTT AGCTTCAAGC AAAGTTATTT TGATGAGGAA CAACATCACT CTCTCTTTTG ATGACATCGA AGCTAATTTC GCTCCGTCAG TGAAGGGTAC AGGTGAAATT GGAGTAGTTT ATGTGGCAGA GCCTCTTGAC GCTTGTCAAA ATCTTATGAA TAAGCCAGAA CAGAGCTCCA ATGAAACTTC CCCTTTTGTG TTGATCGGTA GAGGAGGCTG TAGTTTTGAA GAGAAAGTGA GAAAAGCGCA GAGAGCTGGT TTTAAAGCTG CCATTATCTT TGACAATGAA GACCGTGGAA CATTGATTGC AATGGCAGGT AACTCGGGAG GTATAAAGAT TCATGCGGTT TTCGTTACGA AAGAAACGGG AGAAGTGTTG AAGGATTATG CGGGTTTTCC CGATACGAAA GTTTGGTTGA TTCCAAGTTT TGAGAACTCG GCGTGGTCGA TTATGGCGGT TTCATTCATT TCGCTGCTTG CGATGTCGGC TGTTCTCGCT ACTTGTTTCT TTGTGCGTAG GCATCGGATA AGAAGGCGGA CATCTCGGTC CTCTCGAGTC CGTGAGTTCC ATGGTATGAG CCGCCGCTTG GTTAAAGCAA TGCCGAGTCT TATATTCTCT TCGTTTCACG AAGACAATAC TACTGCATTT ACTTGCGCTA TTTGCCTCGA AGACTACATT GTTGGAGACA AGCTCAGGCT CTTACCTTGC TGTCACAAGT TTCATGCTGT GTGTGTTGAC TCGTGGTTAA CCTCTTGGAG AACTTTCTGT CCGGTGTGCA AACGAGATGC AAGAACGAAC ACGGGCGAGC CTCCGGCTTC AGAGAGCACG CCATTGCTCT CATCCGCTGC ATCGTCTTTC AACTCTTCCT CTCTGCACTC TTCCGTCAGA TCATCCGCAC TATTGATTGG TCCTTCCATG GGCTCATTAC CGTCTTCAAT CTCTTTCTCT CCCGCATACG CGAGCTCATC CTATATCAGA CAATCGTTCC AGTCTTCCTC TAACCGTCGA TCTCCTCCAA TAAGCGTAAG TCGAAGCTCT GTGGATCTAA GGCAACAAGC AGCATCTCCA TCACCATCAC CATCACAGAG ATCATACATT TCCCATATGG CTTCTCCACA GTCACTGGGT TACCCGACTA TCTCCCCTTT CAACACGAGG TACATGTCAC CGTACAGGCC TAGCCCGAGC AATGCATCGC CTGCAGTGGC CGGATCATCA AATTATCCAT TCAATCCACT GCGTTACAGT GAATCAGCCG GAACTTTCTC TCCATACGCC TCTGCAAACT CGCTTCCAGA CTGTTAA 
Length1347
Protein Sequence
Protein Residue
Map Locationscaffold_2: 14286024.. 14287689
Download Sequence
A.thaliana
AGI-codeAT1G71980.1
DescriptionProtease-associated (PA) RING/U-box zinc finger family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
7.07107 Ahg341959 Octicosapeptide/Phox/Bem1p family protein
13.2665 Ahg944195 RUB1 conjugating enzyme 1
18.9737 Ahg492460 NIN like protein 7
22.7156 Ahg495156 CLPC homologue 1
23.4094 Ahg474479 mitogen-activated protein kinase 18
31.9687 Ahg478924 Class I glutamine amidotransferase-like superfamily protein
32.078 Ahg473585 lectin protein kinase family protein
42.4735 Ahg491716 cyclic nucleotide-gated channel 17
44.1928 Ahg896967 Transmembrane amino acid transporter family protein
44.699 Ahg494469 NPR1-like protein 3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression