| Annotation |
|---|
| Description | jgi|Araly1|489866|fgenesh2_kg.6__3000__AT4G10180.1 |
| Sequence |
CTCCCATCGT CTCCTCCATT TTCACCACTA AAACCAGAAC ACAAACCTTC CTTTATTGTG CCCTTTTGGG CCAACAAATG TTCACAAGCG GTAACGTCAC CGCTAGGGTT TTCGAACGTC AGATTCGTAC TCCTCCTCCC GGCGCTTCCG TAAATCGCGC AAGACACTTC TACGAAAACC TAGTCCCAAG CTACACACTC TACGATGTCG AATCTCCCGA TCACTGTTTC CGCAAATTCA CAGAAGACGG ACTCTTCCTC ATTAGTTTCA GCCGTAACCA CCAAGAACTC ATAGTCTATC GTCCTTCTTG GCTCACATAT TCAACAACCT CCGATGATGA TGATTCCACT CCTCTACCTC GCCGTGCTTC GAAATTCGAT AGCTTCTTCA CTCAACTCTA CTCAGTCAAT CTTGCTTCAT CGAACGAACT TATCTGCAAA GACTTCTTCC TCTACCACAA AACTCGTCGT TTCGGTCTTT TCGCTACTTC AACAGCTCAG ATCCATGATT CATCTCCTAC TAATGACGCG GTTCCTGGTG TTCCATCGAT TGATAAGATC ACTTTCCTAC TTCTTCGATT AGATGATGGT GATGTTCTTG ATGAGAGGGT TTTTCTTCAT GATTTCGTCA ATTTGGCTCA TAATATGGGT GTGTTTCTCT ATGATGATCT TTTAGCGATT CTATCGTTGC GTTATCAGAG GATTCATCTT CTTCAGATTA GAGATTCTGG TCATCTTGTT GATGCTCGTG CTATTGGTTA CTTTTGTCGT GAAGATGATG AGCTTTTCCT CAATTCGAGT TCTCAGGCAA TGATGAGTCA AGATAAGAAC AAACAGCAAA GTTTATCGGG GAATAAGGAT GACGATGATG TTGCGGAGAA TGGGTTGCAT TGTAGTCAGC CTCAGCCGAA TGCTACGAAT TCGTTTCTTA GTGGTATTAA GCAACGATTA CTTTCTTTTA TCTTCAGGGA GATTTGGAAT GAAGAATCGG ATAATGTACT GAGGGTTCAA AGTCTTAAGA AGAAGTTCTA TTTCCATTTC CAGGATTATG TCGACTTGAT TATTTGGAAG GTTCAGTTTT TGGATCGACA ACACCTGCTA CTCAAATTTG GCAGTGTAGA TGGTGGGGTA ACAAGAAGTG CTGATCATCA TCCAGCTTTC TTTGCGGTGT ATAATATGGA GACAACTGAC ATTGTAGCAT TCTATCAGAA CTCAGCAGAA GATCTTTACC AATTATTTGA GCAGTTCAGT GATCACTTTA CCGTATCAAG TAGTACACCA TTCATGAACT TTGTAACATC GCATTCTAAC AGCGTCCATG CTCTGGAACA ACTAAAGTAC ATGAAGAACA AATCAAACAG TTTTTCTCAG TTTGTGAAGA AGATGTTGCT CTCTTTACCT TTCAGTTGTC AGTCACAAAG TCCCTCCCCA TATTTCGACC AATCTCTCTT CCGGTTCGAT GAAAAGTTAA TTTCCGCAGC AGATAGGCAT AGGCAATCCT CAGACAATCC AATCAAGTTC ATATCTCGAA GGCAACCGCA AACGCTGAAA TTCAAGATAA AACCAGGACC AGAGTGTGGA ACTGCAGATG GTCGGAGCAA GAAGATATGT TCATTCTTGT TCCATCCTCA TTTACCACTT GCCATCTCTA TTCAACAAAC ACTTTTCATG CCGCCTTCTG TCGTCAATAT CCATTTTCGG CGATGACCTC TTGTGGGTTC CATCAGTCTA GTAGTCTGTC TACATGTTGT AATCTATTGT TTGTAATA |
| Length | 1768 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 19055703.. 19058433 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G10180.1 |
| Description | light-mediated development protein 1 / deetiolated1 (DET1) |
| TAIR curator summary | Encodes a nuclear-localized protein that acts as a repressor of photomorphogenesis and may be involved in chromatin remodeling. |
| Alias | [ATDET1][DET1][FUS2][DE-ETIOLATED 1][FUSCA 2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 5 |
Ahg488313 | Protein kinase superfamily protein |
| 8.06226 |
Ahg929581 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| 9.38083 |
Ahg908068 | Zinc knuckle (CCHC-type) family protein |
| 12.6491 |
Ahg484793 | ARID/BRIGHT DNA-binding domain-containing protein |
| 13.6748 |
Ahg478051 | NagB/RpiA/CoA transferase-like superfamily protein |
| 16.3401 |
Ahg337067 | AAA-type ATPase family protein |
| 17.3205 |
Ahg943759 | Nucleotidyltransferase family protein |
| 18.1659 |
Ahg935710 | myb-like transcription factor family protein |
| 19.1833 |
Ahg933960 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 19.2614 |
Ahg897235 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|