Detail


ID : Ahg897258

Blast(Query):  A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|897258|Al_scaffold_0005_1224
Sequence
ATGAGACAGT TTCTTTTATT CTCTTACAGT GCTCTCATGT TACTTGATGC ATACGGTTTT ACCGATGAAA CTGATAGGCA AGCGTTGCTC GAGTTCAAGT CTCAAATTTC TGAAGAAAAA ATAGATGTCT TGTCCTCATG GAATCACTCT TTCCCTCTCT GCAGCTGGAC TGGGATTACA TGTGGCCGCA AGCACAAGAG AGTGATTGGT TTGGACCTCA AAGGATTGCA ATTAAGCGGC GTGATATCAC CATATATTGG TAATCTTTCG TTTCTCGTAT GGCTTAATCT CTCTGATAAC TCTTTTGGTG GTACCATTCC TCAAGAGGTG GGAAACTTGT TTAGACTTAA ACACTTGGAT ATGAGCTTTA ATCTTTTGGG AGGAGGGATT CAAGTCAGTC TATCTAACTG CTCTAGATTG GTGGTGCTTA TTTTTGATTC AAATCATCTT GGGGGAAGTG TTCCTTCAGA ACTAGGGTCA TTGAGGAAGC TTGTTAGTTT ATATCTTGGT GGTAACAACT TGAAAGGGAA GCTCCCTGCA TCTCTAGGAA ACTTGACATC CCTTAGAGAA CTTCACCTTG GATTTAACAA TATGGAAGGA GGAATTCCGG ATAATATAGC TAGATTGAAT CAAATGTTGG TACTTGATTT AGCAGTGAAC AATTTCTCAG GTGTTTTTCC TCCCCCCATC TACAATTTGT CCTCACTTAA GTATTTATAC ATCTCTGGTA ATCGTTTCTC AGCTTTCTTA AGATCTGATT TTGGTAAGCT GCTACCAAAC CTAGTAGAGT TAAATATGGG ACAAAATAGT TTCAGAGGAG TCATTCCAAC AACACTTTCC AACATCTCGA CCCTTCAAAA GTTGGCAATC AATGACAACA ATCTTACAGG AAGTATTCCT CTAAGCTTGG GAAAATTACG GAATTTGCAA TGGCTATTTC TTTTTAGCAA TTCTTTGGGA AGTTACTCTT TCGGAGATCT TGACTTTCTG GTTGCTTTGG CTAACTGCAC TAAACTAGAG AAATTAGAGA TTAGTGATAA TAGGCTCGGA GGTGATTTAC CTATCTTCAT TACGAATCTC TCCACGAACC TCTACACTTT AGACCTTGGG AAAAATTTCA TCTCTGGAAG CATTCCTCGT GACATCGGGA ATCTCATAAG CCTACAAAGC CTTGTGTTGC AAGAAAATAT GTTGACAGGT GCATTCCCAA CTTCCCTTGG TAAAATTTCT AGGTTGGAGG GAATAAATCT CGATTCAAAT AAAATGTCAG GAAAAATACC ATCTTTTATA GGCAACCTCA CTCGGTTGGA CAAACTGTAT TTGTTCAACA ACAGTTTCGA AGGAACCATT CCTCTGAGTC TCAGTAACTA CATAGCACGT AATTCCTTGA CCGGCGCTCT ACCGGAAGAT GTTGGACGAC TTGAATATCT TGTCTATCTA TCTGTTGCAT ATAATAAACT ATCTGGACAT CTCCCACATT CCTTGGGAAA TTGTCTCTCG ATGGAAACAC TTTTGTTGCA AGGAAACTAT TTTGATGGAG CCATTCCGGA TATAAAAGGT GTTAAAAGAG TTGATTTCTC GAACAATACT TTCTCTGGGA GTATACCTGC ATATCTTTCA AACTTTTCCT TGTTGGAGTA TCTTAATCTA TCCATCAACA ATCTCGAGGG AAGTGTGCCA ACTGAAGGGA AATTTCAGAA TGCTACTATA GTTTTGGTAT TTGGAAACAA AAATCTTTGT GGAGGCATCA AGGAATTGAA ACTAAAGCCA TGCTTTAGGG GAGCTCCACC GATGGGATCA AAGCATTCTT CTCGTTTAAA AAGAGTTGTG ATCGGAGTAA GCATAGGCAT GGCTTTGCTT TTTCTGCTGT TCGTAGCTTT AGTTTCTCTA CGTTGGTTCA GAAAAAGAAA GAAGAACCAA CAGACTAATA ATCCAACTCC TTCCACATTG GATGTCTTTC ATGAGCAAAT AAGTTATGGA GAGATCCGAA ATGCGACTGA TGGCTTCTCT TCGAGCAATA TGATTGGGTC AGGAAGTTTT GGTACCGTGT TTAAAGCTGT GCTCCCTGCC GAGAACAATG TTGTTGCAGT GAAAGTTCTA AACATGCAGA GACGTGGAGC AATGAGAAGC TTTATGGCAG AATGTGAATC CCTCAAGGAC ATAAGGCATC GTAATCTTGT GAAACTATTG ACGGCTTGTT CGAGTATTGA TTTCCAAGGA AACGAATTCA GAGCTCTCAT ATATGAGTTC ATGCCTAATG GAAGCTTGGA TACATGGCTC CACCCAGAGG AAGTGGAAGA GATTCGTAGG CCTTCAAGAA CCTTGACACT TCTTGAAAGG CTTAACATTG CCATAGACGT CTCCTCTGTT TTGGATTATC TTCATGTTCA GTGTCATGAA CCTATAGCTC ATTGTGATTT GAAGCCAAGC AACATCCTTC TAGACGATGA TCTAACGGCC CATGTTAGCG ACTTTGGTCT GGCCCAGCTT CTCCTAAAAT TCGACCAAGA GTCCTTCCTC AACCAACTCA GCTCCACCGG CGTCAGAGGA ACCGTCGGCT ATGCCGCACC GGAGTATGGA ATGGGAGGAC AACCATCAAT ACATGGTGAT GTGTATAGCT TTGGGGTTCT CCTTTTGGAA ATGTTCACAG GAAAGCGACC AACCAACGAG TTATTTGGGG GAAACTTCAC CCTACACAGC TACACCAAGT CGGCGTTGCC GGAAAGAGTC ATGGATATTG CTGACAACTC CATTCTTCAC AGCGGTCTCA GAGTCGGTTT CCCTATTGCT GAGTGCTTAA CATCAGTTTT GGAGGTGGGA CTTAGGTGCA GTGAAGAATA TCCGGCGAAC CGGTTGGCAA TGAGTGGAGC TACAAAGGAG TTAATCTCGA TCAGAGAGAG GTTCTTTAAA ACCAGAAGAA CAGCTAGACG TTGA
Length2934
Protein Sequence
Protein Residue
Map Locationscaffold_5: 10922987.. 10926105
Download Sequence
A.thaliana
AGI-codeAT3G47090.1
DescriptionLeucine-rich repeat protein kinase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
10.0995 Ahg933139 Leucine-rich repeat protein kinase family protein
11.9583 Ahg478531 Protein of unknown function, DUF593
14.6969 Ahg495325 conserved peptide upstream open reading frame 14
15.0333 Ahg327678 cyclic nucleotide-gated channel 13
16 Ahg935611 cyclic nucleotide gated channel 3
19.0263 Ahg471395 SNARE associated Golgi protein family
21.9089 Ahg921319 T-complex protein 11
24.8193 Ahg336505 leucine-rich repeat transmembrane protein kinase family protein
27.3861 Ahg938727 Insulinase (Peptidase family M16) family protein
32.2645 Ahg900074 Protein of Unknown Function (DUF239)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression