| Annotation |
|---|
| Description | jgi|Araly1|935611|scaffold_403599.1 |
| Sequence |
TGTGGAAGAT AACAAGCAGA TATGATGAAT CCCCAAAGAA ACAAATTCGT AAGGTTTAAT GGAGATGATG AGTTTTCGAC CAAAACTACT AGACCATCAG TAACTTCAGT TATGAAAACC GTTAGACGAA GCTTCGAAAA GGGGTCAGCG AAAATCAGAA CCTTTAAGCA GCCCTTGAGC TTTCATTCAA AGAAGAATAA AGAAAACAAG AAGAAGAAGA TACTAAGAGT GATGAATCCT AACGATTCTT ATCTTCAAAA CTGGAACAAG ATTTTCTTGC TTCTCTCTGT TGTGGCTTTA GCCTTTGATC CTCTGTTTTT CTATATCCCC GTTGTGAACC CCGTGAGATT CTGTCTTAAT CTAGATACGA AACTCGAGGC AACCGCTTGC ATTTTCCGCA CTTTCATCGA CGCTTTCTAC GTGGTTCACA TGCTGTTTCA GTTTCATACC GGTTTCATCG CTCCTTCGTC TCGTGGTTTC GGAAGAGGAG AGCTTAATCA GAATCCTAAA GAAATCGCTA TGAGATACCT CAGCTCATAC TTTCTGGTTG ATCTTCTTTC GATTCTCCCT ATTCCACAGG TAGTTGTTCT AGCTATTGTT CCGAGGATGA GAATACCCGC GTCGCTGGTA GCAAAAGAGC TATTGAAATG GGTAATATTT TGCCAATATG TTCCGAGGAT AGCGCGAATC TATCCGCTTT TTAAAGAAGT AACAAGAACT TCTGGTTTGG TAACTGAAAC TGCTTGGGCT GGAGCTGCTT TAAACCTATT CCTCTACATG TTAGCTAGCC ACGTTTTTGG GTCTTTTTGG TACTTGATTT CGATAGAAAG GAAAGATAGA TGTTGGCGCG AAGCGTGTGC TAAGATAGAC GGATGCCGTC ATGAAAAACT GTACTGTTCA CCAACAGGGG AAGACAATAG GCAGTTTTTA AAGGGTTCTT GTCCGTTGAT CGATCCCGAA GAAATCTCAA ACTCGACGGT TTTCAACTTT GGTATATTCG CTGATGCATT GCAGTCTGGA GTTGTGGAGT CTAGAGATTT CCCTAAGAAG TTTTTCTACT GTTTCTGGTG GGGTCTCCGC AATCTTAGTG CTTTGGGCCA AAACTTGAAG ACGAGTGTCT TTGAAGGAGA GATCATTTTT GCGATAGTCA TATGTGTCTC TGGACTAGTC TTGTTTGCTC TTCTCATTGG AAATATGCAG AAATATTTGC AATCAACTAC TGTAAGAGTT GAGGAAATGA GAGTGAAAAG GAGAGATGCA GAGCAATGGA TGTCTCATCG GATGTTGCCA GACGATCTGA GAAAACGTAT CCGTAAATAC GAACAGTATA AATGGCAAGA AACCAAAGGA GTTGAGGAAG AAGCTCTTCT CTCTAGTCTT CCAAAAGATC TCAGAAAGGA CATTAAACGC CATCTTTGTC TCAATTTGCT CAAAAAGGTG CCTTGGTTTC AAGCTATGGA TGATCGGTTA CTAGACGCTT TATGTGCTCG TCTCAAAACG GTTCTTTATA CAGAGAACAG TTACATTGTG CGTGAAGGTG AACCAGTGGA GGATATGTTG TTTATCATGA GAGGAAATCT AATAAGCACC ACGACTTATG GTGGCAAAAC TGGCTTCTTC AATTCGGTTC GCTTAGTTGC TGGTGATTTT TGTGGAGATC TTCTCACTTG GGCATTAGAT CCTCTCAGTT CAAACTTCCC TATCTCTAGT AGAACCGTTC AAGCTTTGAC AGAAGTCGAA GGCTTTGTTC TCTCAGCTGA TGATCTCAAG TTTGTTGCTA CTCAGTATCG CCGCCTCCAT AGCAAGCAAC TCCGACACAT GTTCAGGTTT TATTCGGTGC AATGGCAGAC ATGGGCAGCA TGTTTTATAC AAGCAGCATG GAAGAGACAT TGTAGAAGGA AGCTTTCAAA GGCTTTACGT GAAGAAGAAA GCAAACTACA TAACACTCTT CAGAACGATG ATTCAGGAGG CAATAAGCTT AACTTAGGTG CTGCGATTTA TGCGTCGAGG TTTGCTTCTC ATGCTCTGAG GAATCTAAGG GCGAATGCAG CAGCACGAAA CTCTAGATTT CCTCATATGT TATCTTTGTT GCCTCAGAAA CCAGCCGATC CTGAGTTTCC TATGGATGGA ACCTAATTGT GTATAGTTGA CTCTAT |
| Length | 2156 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 21369500.. 21372364 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G46430.1 |
| Description | cyclic nucleotide gated channel 3 |
| TAIR curator summary | cyclic nucleotide gated channel (CNGC4), downstream component of the signaling pathways leading to HR/resistance |
| Alias | [ATCNGC3][CNGC3][CNGC3.C][cyclic nucleotide gated channel 3] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1.41421 |
Ahg900074 | Protein of Unknown Function (DUF239) |
| 2.23607 |
Ahg494374 | peptide transporter 3 |
| 2.44949 |
Ahg492857 | VACUOLAR SORTING RECEPTOR 7 |
| 4 |
Ahg887308 | |
| 5.19615 |
Ahg475116 | WRKY family transcription factor |
| 7.74597 |
Ahg495173 | Clp ATPase |
| 8.94427 |
Ahg322779 | Protein of unknown function (DUF707) |
| 8.94427 |
Ahg910885 | protein serine/threonine kinases;protein kinases;ATP binding;sugar binding;kinases;carbohydrate binding |
| 10.4881 |
Ahg483688 | cytochrome P450, family 704, subfamily A, polypeptide 1 |
| 10.8167 |
Ahg478321 | monodehydroascorbate reductase |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|