Detail



ID : Ahg897712

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|897712|Al_scaffold_0005_1678
Sequence
ATGAAACCAT CATCAGCTTC AAGATTTTAT TTATCTTTCT CACACTTTCT CATACTCTTT TGTCTTCTCA CACAAACCCA TGTAGCTCAA GGATCCCATC AATGGCAATC ACCAATCAAA ACCGTCGTCG TTTTAGTACT AGAGAATCGA TCTTTCGATC ATCTCTTAGG ATGGATGAAG AACTCAGTAA ACCCGACAAT AAACGGTGTA ACGGGTCAAG AATGTAACCC GGTTCCGAAT TCCACACAAA CCATATGTTT CACTAGTGAT GCTGAGTTTG TGGATCCGGA TCCGGGTCAT TCGTTTGAAG CTGTTGAGCA ACAAGTATTT GGGTCCGGGT CGGGTCAGAT CCCGTCGATG ATGGGTTTTG TTGAGCAAGC GCTTTCCATG CCGGGAAATT TGTCGGAGAC TGTAATGAAA GGCTTTAGGC CTGAAGCTGT TCCGGTTTAT GCCGAGCTGG TCAAAGAATT CGCTGTGTTC GACCGGTGGT TTTCATCGAT TCCCGGACCG ACTCAACCGA ACCGGTTATT TGTTTATTCG GCTACTTCAC ATGGTTCAAC AAGCCATGTC AAGAAACAAC TCGCTCAAGG GTATCCACAG AAGACTATCT TCGATTCGCT CCACAGCAAC GACATTGACT TCGGAATATA CTTTCAGAAT ATTCCGACCA CATTATTCTA CCGGAATCTC CGACAGCTAA AATACATTTT CAATTTGCAT CAATACGATC TAAAATTCAA GAAAGACGCA GCAAAAGGAA AGTTACCGAG CTTAACCGTC ATCGAACCGA GGTATTTCGA CCTCAAGGGC TTACCGGCCA ACGATGATCA CCCTTCGCAT GACGTGGCTA ACGGTCAAAA GCTGGTTAAA GAAGTGTACG AGGCACTTAG GGCGAGTCCA CAGTGGAACG AGACGCTCCT AGTCATAACT TATGATGAGC ATGGTGGGTT CTATGATCAT GTCAAGACTC CTTATGTCGG TATACCAAAC CCGGATGGGA ATACTGGACC GGCTCCTGGT TTCTTTAAAT TCGACCGGTT AGGTGTTCGG GTTCCTACCA TTATGGTTTC TCCTTGGATT AAAAAAGGAA CCGTGGTGAG TGAAGCAAAA GGACCAACAG AGAGCTCAGA GTACGAGCAT TCATCAATAC CAGCAACCAT CAAGAAACTA TTCAATCTCT CTTCCAATTT CTTAACACAT AGAGATGCTT GGGCTGCTAC TTTCGAAGAC GTTGTTTCTC ACTTAACCAC TCCTCGAACC GATTGTCCCA TGACTCTACC TGAAGTTGCA CCCATGAGAG CCACTGAGCC TAAAGAGGAC GCAGCTCTTT CTGAGTTTCA GGGTGAAGTA GTTCAGCTTG CAGCGGTTCT CAATGGTGAT CACTTCCTCA GTAGCTTCCC GGACGAAGTT GGGAAGAAGA TGACTGTGAA ACAAGCTCAT GAATATGTCA AAGGAGCTAC ATCTCGGTTC ATTAGAGCTA GTAAAGAGGC AATGAAGCTT GGTGCCGATA AATCTGCCAT TGTCGATATG CGATCTTCGC TCACTACACG GCCACGCAAC CTGTGA 
Length1566
Protein Sequence
Protein Residue
Map Locationscaffold_5: 13218409.. 13221036
Download Sequence
A.thaliana
AGI-codeAT3G48610.1
Descriptionnon-specific phospholipase C6
TAIR curator summary
Alias[NPC6][non-specific phospholipase C6]
Gene coexpression
MR
MR Locus Description
18.1659 Ahg480193 O-Glycosyl hydrolases family 17 protein
19.5192 Ahg920007 arogenate dehydratase 1
19.6977 Ahg487523 Eukaryotic aspartyl protease family protein
21.2838 Ahg920358 decoy
22.1811 Ahg491000 beta-galactosidase 3
22.383 Ahg481491 Leucine-rich receptor-like protein kinase family protein
27 Ahg473493 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
29.6648 Ahg496019 Plant protein of unknown function (DUF641)
29.6985 Ahg476070 DHHC-type zinc finger family protein
35.8329 Ahg920285 emp24/gp25L/p24 family/GOLD family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression