Detail



ID : Ahg920007

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|920007|scaffold_101288.1
Sequence
AAAAATCTCC CAACTTTGCT ATGGCTCTGA GGTGTTTTCC CATTTGGGTT TGTCCTCAAA CGACTCATCA TCGTTCTCCT CTTGTGGGTC TCGCTGAATT CGACGCTAAT AAACGCCGTC GTTTCTGTCT CTGGGAGTGC TCTTCTTCAG CTTCTCAGAG GGCTGTCACT GCCATTGAAG GCGAGATTCC TTATAGCCAT GAGCTCAAAA AGTCCTCTGA TGAATTGGGT CTGACTCAGG AGACTCAATC TGTTTCTTTT CACAGAGACT TAAGTATGCT TCCTAAACCG CTAACGGCAA ACAGTCTTTA CTCTTCTGAT GGCGATGATT CAAAAGTCCG AATTTCGTTT CAGGGCATAC CAGGTGCATA TAGTGAAACA GCAGCACTAA AAGCATTTCC AAATTGTGAA ACCGTTCCAT GTGAACAGTT CGAAGCTGCG TTTCAGGCTG TTGAGCTCTG GTTGGTGGAC AAAGCAGTAC TACCGATCGA GAATTCAGTA GGTGGTAGTA TCCACCGTAA TTATGATTTG CTTCTTCGTC ATAGGCTTCA CATTGTCCAA GAAGTCCATT TGCCTGTAAA TCATTGTCTC TTAGGAGTGC ATGGTGTTAA AAAGGAAGAT ATTAAATGTG TTCTAAGCCA TCCTCAGGCG CTTGATCAAT GTGTGAATTC ACTTAACAAT TTAGGCATAC AGAGAATTTC TGCAAAAGAC ACTGCCACTG CTGCTCAGAC TGTTTCTTCA AGCGGTAAGA TCGACGTAGG AGCAATCGCG AGTGTACGGG CTGCAAATAT ATATGGTCTG GATATTCTTG CCGAGAACAT ACAAGATGAT GCTAACAATG TGACTCGCTT TCTGATACTT GCCAGAGAGC CTATGATTCC AAGAACAGAT CGACCATATA AGACAAGTAT CGTGTTCTCG CTAGAAGAAG GTCCTGGTGT GCTGTTCAAG GCCTTGGCTG TTTTTGCTTT ACGAAGCATT AACTTATCTA AGATAGAAAG TCGTCCGCAG AGAAGAAGAC CGTTAAGAGT AGTTGATGGT TCTAACAATG GAAGCGCTAA GTACTTTGAT TACTTATTCT ACATTGATTT TGAGGCTTCC ATGGCTGATA CACGTGCTCA GCATGCTCTT GGCCATCTAC AGGAATTCAC AAGTTTCATC CGTATCCTCG GGTGTTATCC AATGGATCTA GTCAGATAAC CAAGCAAATC TCCTATTGAT 
Length1220
Protein Sequence
Protein Residue
Map Locationscaffold_1: 4531527.. 4534661
Download Sequence
A.thaliana
AGI-codeAT1G11790.1
Descriptionarogenate dehydratase 1
TAIR curator summaryEncodes a plastid-localized arogenate dehydratase involved in phenylalanine biosynthesis. Not less than six genes encoding ADT were identified in the Arabidopsis genome: ADT1 [At1g11790]; ADT2 [At3g07630]; ADT3 [At2g27820]; ADT4 [At3g44720]; ADT5 [At5g22630]; and ADT6 [At1g08250].
Alias[ADT1][AtADT1][arogenate dehydratase 1][Arabidopsis thaliana arogenate dehydratase 1]
Gene coexpression
MR
MR Locus Description
9.79796 Ahg488073 dgd1 suppressor 1
19.0788 Ahg485933 Chalcone-flavanone isomerase family protein
19.5192 Ahg897712 non-specific phospholipase C6
21.4942 Ahg940518 MSCS-like 2
22.5832 Ahg924525 6-phosphogluconate dehydrogenase family protein
24.8998 Ahg931960 clathrin adaptor complexes medium subunit family protein
27.4591 Ahg920718 Endosomal targeting BRO1-like domain-containing protein
29.5635 Ahg940109 Protein of unknown function DUF106, transmembrane
30.7409 Ahg484689 chorismate mutase 1
33.1662 Ahg316819
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression