| Annotation |
|---|
| Description | jgi|Araly1|898803|Al_scaffold_0005_2769 |
| Sequence |
ATGCAGAGTG GAAGTGATAG TGAATATGAG AGTGACGTCG AGGAAGAGTT GGACGACGTT CAAGATACCA ATGTTGGTGG TGCCTCGCGT TACCTAGCAG GTGGCAGTGA TAGTGAAAAC GAGGATCTCC GTAAACGTGT TGTTCAGCCA GCCAAAGACA AGCGTTTTGA AGAGATGGTT AGTACCGCAG ATCAGATGAA GAAAGCCATG AATATCAATG ACTGGGTTTG TCTACAAGAA AACTTTGATA AGATTAACAA GCAGTTGGAA AAAGTTATGA GGGTTACAGA GGCTGTGAAG GCTCCAATCT TGTACATCAA AACCCTTGTG ATGTTGGAAG ATTTTCTAAA TGAAACTCTG GCAAACAAGG AAGCAAAGAA AAAGATGAGT ACTAGCAACT CCAAGGCCTT GAATTCAATG AAACAGAGAT TGAAGAAGAA CAACAAGCTG TATGAAGAAG AGATTAATAA ATATAGGGAG TCTCCAGAAA CCGAGGAAGT GAAGGAATCA GAGGATGCAG ATACGGAAGA TGATGACATT GATGATTACG TTGAGGTTAC TGAGTCTGAA GAGGAGATAA CCAACGATAA AGGTGATCCC TCTTGGGAGA AGATGCTAAG CAAGAAAGAT AAGCTTATGG AGAAGTTGTA TAGTAAAGAC CCTAAAGAGA TCACATGGGA ATGGGTCAAC CAAAAGTTCA AAGAAGTTGT GGCTGCCCGT GGCAGGAAGG GAACTGCACG ATTTGAACTG GTTGATCAGC TTACACACCT GACAAGGATT GCCAAAACTC CAGCACAGAA ACTTGAAATC TTGTTTAGTG TTATTTCTGC ACAGTTTGAT GTGAATCCTG GTCTCAGCGG ACACATGCCT ATCAATGTCT GGAAGAAGTG TGTGAATAAC ATTCTTACAA TACTAGACAT TCTTGTCAAA TATGATAACA TCGTTGTTGA TGACACGGTT GAGCCTGATG AGAATGAAAC TTCAAAACCA GAAGATTTTG ATGGAAAAAT CCGGGTCTGG GGAAACCTTG TTGCATTCGT GGAGAGGATA GACACTGAAT TTTTCAAGAG TTTGCAGTGC ATAGATCCTC ATACACGTGA GTATGTGGAG AGATTGAGAG ATGAGCCGAT GTTCTTAGCT CTTGCTCAAA ACATCCAGGA CTACTTTGAG CGGTCTGGTG ACTATAAAGC TGCTGCAAAG GTGGCCTTAA GACAAGTTGA GTTAATTTAC TACAAGCCTC AGGAAGTTTA TGATGCCATG AGGAAACTGG CTGAGCTGGT GGTGGAAGAA GATGAAGAAG AAGATAGTGA GGAGCCCAAA GAGGAAACTG GACCTCCTTC ATTCATTGTT GTTCCAGAGG TTGTTCCTCG TAAGCCTACC TTCCCAGAGA GTAGTCGAGC TATGATGGAT GTTCTTGTCT CTCTTATATA CAAATATGGA GATGAACGAA CTAAAGCCCG TGCGATGTTA TGTGATATCT ATCACCATGC TTTAGTGGAC AACTTTGTGA CAGCTAGGGA TTTGTTGCTG ATGAGTCATC TGCAGGACAA TATTCAGCAC ATGGACATCT CAACCCAGAT CCTCTTTAAT AGGTCCATGG CACAGCTTGG TCTCTGCGCA TTCCGGGTTG GAATGATTAC AGAGGCTCAC AGCTGCCTCT CTGAGTTGTA CTCTGGTCAA AGGGTGCGGG AGTTACTTGC TCAAGGTGTC TCGCAAAGCC GCTACCATGA GAAGACTCCC GAGCAGGAAA GATTGGAGAG GAGACGACAG ATGCCATATC ACATGCACAT AAACCTTGAG CTTCTCGAAG CTGTTCATCT CATCTGTGCC ATGCTGCTAG AGGTCCCTAA CATGGCAGCC AATTCTCACG ATGTCAAACG CAAGGTGATT AGCAAGAATT TCCGTCGCCT GCTCGAGATC AGTGAGAGGC AAGCATTCAC TGCTCCTCCT GAGAACGTTC GTGACCATGC CATGGCAGCA ACCCGAGCTC TGACTAAAGG AGACTTCCAA AAGGCTTTTG AAGTTGTGAA GTCTCTTGAT GTCTGGAAAC TGTTCAAGAA TCGGGAAACC ATCCTTGATA TGGTGAAGGA TAGGATCAAA GAAGAGGCTT TGAGGACTTA CCTCTTCACA TACTCGGCCT CCTACGAGTC CCTAAGTCTA GATCAGCTTG CCAAGATGTT TGATCTCTCT GAGAACCAAG TCCACAGCAT CGTGAGCAAG ATGATGATCA ATGAAGAACT CCATGCAAGC TGGGACCAAC CTACACGTTG CATAATCTTT CACGATGTCC AGCACACCAG GTTGCAAACC TTGGCGTTCC AGTTAACTGA GAAACTTGCT GTTCTTGCGG AGAGCAACGA AAGAGCAATG GAGGCTAGGA CCGGTGGTGG TGGTGTGGAT CTAAGCTCAA GGAGAAGAGA CAACAATCAA GAATATGCAG GGGGAGCAGG TGGTGGAAAG TGGCAAGACA ATATGTCTTA CAATCAAGGA AGACAAGGTT ACAATGGCGG TGGTAGATCT GGTTATGGTG GTAACAGATC ATCTGGACAT GCAAGAGACT GGTCAGGTCA AAATCGAGGG AGTGGTGGGT ATGGAGGAAG AGGTGGAACA GGGAACAGAG GAATGCAGAT GGATGGCACA AGCCGTATGG TAAGTCTTAA CCGAGGTGTT CGTGCATAG |
| Length | 2679 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 17867766.. 17870623 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G56150.1 |
| Description | eukaryotic translation initiation factor 3C |
| TAIR curator summary | member of eIF3c - eukaryotic initiation factor 3c |
| Alias | [ATEIF3C-1][ATTIF3C1][EIF3C][EIF3C-1][TIF3C1][eukaryotic translation initiation factor 3C] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.44949 |
Ahg485637 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| 2.64575 |
Ahg901385 | Phosphoribosyltransferase family protein |
| 3.74166 |
Ahg938850 | DNAse I-like superfamily protein |
| 5.47723 |
Ahg476612 | Pentatricopeptide repeat (PPR) superfamily protein |
| 8.7178 |
Ahg489491 | Glutamyl/glutaminyl-tRNA synthetase, class Ic |
| 9 |
Ahg492821 | JUMONJI 14 |
| 9.79796 |
Ahg493685 | beta glucosidase 42 |
| 12.3288 |
Ahg906059 | Transducin/WD40 repeat-like superfamily protein |
| 12.3693 |
Ahg486203 | guanylate kinase |
| 14 |
Ahg482413 | mitochondrial ribosomal protein S14 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|