Detail



ID : Ahg485637

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|485637|fgenesh2_kg.5__1629__AT3G52660.1
Sequence
AGTCTCGCTT AGGCATCTTT TAGGTCATAT CATACAAAAA TTTCAACACC TGAGCTGCGC GAATAAACAA ACACTTGTTC ATCCTCTCCG TAATTCTCAA AATTAGGGTT TTCTTCCGGC AGCTCTCTCA GTTGTCTTGC AAGCGTTCTT TTCTAGATAC TTAAGATGTC AAGGACGAGG ACTGCTGCTT CTGAGGCTCA CGATTCAATG GAGTCTGAGG AAAGGGTAGA CCTTGACGGT GACAATGATC CTGAGGAGAT TCTGGAGGAG GAAGTTGAAT ATGAAGAAGT AGAAGAGGAG GAGGAAATTG AAGAGATAGA AGAGGAGATA GAGGAGGAGG TGGAAGTGGA AGAAGAGGAG GAGGATGCTG TTGCAACGGA AGAGGAAGAA GAAAAGAAAA GGCATGTTGA ACTCCTTGCA CTTCCTCCAC ATGGTTCAGA GGTTTATCTT GGAGGGATTC CTACTGATGC TACTGAAGGG GACTTAAAGA GCTTCTGTCA ATCAATAGGA GAAGTTACTG AGGTTAGGAT AATGAGGGAA AAGGAATCTG GTGATGGAAA GGGGTATGCA TTTGTGACAT TCAGAAACAA GGACTTAGCA GCTGAAGCAA TCGATACTCT AAATAGCACT GAATTCAGAG GTAAAAGGAT AAAATGTTCG ACTACCCAAG CAAAGCATCG TCTCTTTCTT GGCAATGTTC CTAGAAATTG GACTGAGTCA GACATTAAGA AAGCAGCGAA TAAAATTGGT CCAGGCGTTC AAATTGTCGA ACTCCCAAAG GAACCACAAA ATATGGGCCG GAATCGTGGA TTTGCTTTCA TCGAGTATTA CAACCATGCA TGTGCTGAAT ACTCGAAACA AAAAATGTCA AATCCGAGTT TTAAGCTTGA TGATAATGCC CCAACTGTAA GCTGGGCTGA ATCAAGGAGT GGAGGAGGAG GAGACTCTTC GGCTTCCCAG GTCAAGGCAT TGTACATCAA GAACTTGCCT AGAGATATAA CACAAGAACG TCTAAAGGCA TTATTTGAAC ATCACGGGAA AATACTGAAA GTGGTGATTC CACCAGCAAA ACCAGGAAAG GAAGACAGTA GATACGGATT TGTGCACTAT GCAGAGAGGA CAAGTGTCAT GCGAGCTTTG AAAAACACTG AAAGATATGA GATTGATGGT CATATGTTGG ATTGTACTCT GGCAAAGCCT CAAGCGGATC AAAAGGCGAA TACAAATACA GTTCAGAATG TGCAGAAATC ACAATTGCAA CCAAACTATC CTCCTCTTCT TAGTTATGGC ATGGCTCCTA GTCCCTTTGG TGCTCTTGGT GGATTTGGAG CTTCTGCCTA CTCACAACCA TTAATGCATG CGGGAGGTCA CGCAGCTGGT GGAATGTCGA TGATGCCAAT AATGTTACCC GATGGAAGAA TCGGATACGT CTTGCAACAG CCTGGACTAG CAGCTATGCC ACAACCACCA CCAAGGCCTT CTCCACCATA TAGGGGAGGC AGCGGTTCGA GCAGCAGCAG CAGCAGCAAA CGAAGTAGCG ACAATGGTAG AGGACGAAGC CGTTACAATC CTTATTAGTA ATTTAATAAT TCTGTCTTCT TTATTTGGAA AAACACCCCA AAAAGTCAAT GTTAACCATT GT 
Length1642
Protein Sequence
Protein Residue
Map Locationscaffold_5: 15319255.. 15322420
Download Sequence
A.thaliana
AGI-codeAT3G52660.1
DescriptionRNA-binding (RRM/RBD/RNP motifs) family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2.44949 Ahg898803 eukaryotic translation initiation factor 3C
4.24264 Ahg319846 nucleic acid binding;zinc ion binding;DNA binding
11.3137 Ahg473553 Smg-4/UPF3 family protein
11.4018 Ahg941602 alpha/beta-Hydrolases superfamily protein
13.9642 Ahg480812 nucleic acid binding;zinc ion binding;DNA binding
15.0997 Ahg474047 stomatal cytokinesis defective / SCD1 protein (SCD1)
15.8114 Ahg939389 F-box/RNI-like superfamily protein
18.1659 Ahg888428 compromised recognition of TCV 1
19.0788 Ahg470907 Plant-specific transcription factor YABBY family protein
20.4939 Ahg496445 hipl2 protein precursor
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression