Detail



ID : Ahg902141

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|902141|Al_scaffold_0004_2791
Sequence
ATGGCCAAGT CTGTCCTTTC GGCAAGAAAT CGAAAAAGAT GCTCCTACGT CCCTCTCTCC TCCTCATCGT CGTCCTCTAA CAATATCGGG AAACTCCACT TGAAGTTTTC TTTGCTCTTG CGTTCTTTCA TCAACATCAT TAATATCCCC GCTTGCAAAA TCCTCTCTCT TCCCTCTCCG CCGTCTTCTT CTTCCGGCGT CTCTAACCAA CTGATCTCAC TCGTCACCGG TGGATCCTCT TCTCTCGGGA GAAGAGTTAC CGGGACTCTG TACGGACACA AAAGAGGCCA CGTCACGTTT TCGGTCCAGT ACAACCAGAG ATCCGACCCG GTCTTGCTCC TGGACCTGGC CATGTCAACG GCAACTCTCG TCAAAGAGAT GTCCTCGGGG CTCGTCAGGA TCGCTTTGGA GTGCGAGAAG CGTCATCGAT CAGGAACGAA GCTTTTCCAA GAGCCCAAAT GGACGATGTA CTGCAACGGG AGAAAGTGCG GTTACGCTGT GTCACGTGGC GGGGCGTGTA CTGACACGGA TTGGCGCGTG TTGAACACGG TCTCTAGGGT TACTGTTGGA GCCGGAGTTA TTCCGACGCC GAAGACTATT GATGACGTGT CCGGTGTTGG TAGTGGAACG GAGCTTGGGG AGCTGTTGTA TATGAGAGGA AAATTTGAAC GAGTCGTTGG GAGCCGTGAC TCGGAGGCGT TTTACATGAT GAACCCGGAC AAAAACGGAG GTCCAGAACT CAGTATTTTT CTTCTTAGAA TATAA 
Length765
Protein Sequence
Protein Residue
Map Locationscaffold_4: 19341926.. 19343273
Download Sequence
A.thaliana
AGI-codeAT2G41660.1
DescriptionProtein of unknown function, DUF617
TAIR curator summaryEssential for hydrotropism in roots. Mutant roots are defective in hydrotropism, and have slightly reduced phototropism and modified wavy growth response. Has normal gravitropism and root elongation.
Alias[MIZ1][mizu-kussei 1]
Gene coexpression
MR
MR Locus Description
37.5233 Ahg934564 PYR1-like 4
42.4028 Ahg315184 cyclic nucleotide-gated channel 12
45.6399 Ahg943817 Arabidopsis phospholipase-like protein (PEARLI 4) family
47.1169 Ahg903471
49.2341 Ahg492684 HSP20-like chaperones superfamily protein
51.4976 Ahg321547 Uncharacterised protein family (UPF0497)
52.1249 Ahg489663 bZIP transcription factor family protein
56.7098 Ahg948263 VQ motif-containing protein
77.9038 Ahg478968 Legume lectin family protein
78.4602 Ahg889155 cytokinin oxidase 4
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression