| Annotation |
|---|
| Description | jgi|Araly1|903949|Al_scaffold_0003_1077 |
| Sequence |
ATGGCGAGCG CGGCACGGGG AGAGAGCAGC AATCCATACG GCGGCGGATT GGGAACCGGA GGAAAGTTCC GGAAGCCAAC GGCTCGAAGG ACTCAGAAAA CTCCGTATGA TCGACCGCCG ACTTCTGTGA GGAACTCTGG AATTGGTGGC GAAGATGTCA GAGGCGGCGG TTGGTTGTCG AAATTGGTGG ATCCGGCGCA GAGGCTTATT ACTTATAGTG CTCATAGGCT CTTCGCGTCC GTTTTCCGGA AACGCCTCGG CTCAGGTGAG ACGCCTGTAC AGTCGCCGGA GCAGCAGAAG CAGATTCCAG AAAGAGATGT GAATCAGGAG ACGAAGGTAG TACACAAGGA GGACGTCTCT AATCTGTCCA TGAAGAATGG TTTGATTCGG ATGGAAGATA CCAATGCCTC TGTCGATCCA ACGAAGGATG GATTTACAGA TCTTGAGAAA ATCTTACAGG GAAAAACTTT TACAAGGTCT GAAGTTGATC GATTAACTAC ATTGCTGCGT TCAAAAGCTG CTGATTCATC CACTATGAAT GAGGAGCAGA GAAATGAAGT GAGTATTGTT GTGAGACATC CACCATCACA TGAGAGGGAC AGGACGCATC CAGATAATGG AAGTATGAAC ATCCTTGTTT CAACACCTCC TGGAAGTTCG AGAGCTCTCG ATGAGTGCAT TGCTTCGCCA GCACAGCTTG CAAAAGCTTA CATGGGTAGC AGACCTTCAG AAGTTACTCC TTCTATGTTG GGGTTGCGTG GTCAAGCGGG TAGGGAAGAT TCTGTTTTCC TGAACAGAAC CCCTTTTCCG CAAAAGTCAC CTACAATGTC ACTGGTAACA AAGCCTTCTG GACAAAGACC TTTGGAAAAT GGTTTTGTTA CCCCTAGATC TCGGGGAAGA TCTGCTGTTT ATAGCATGGC CAGAACACCA TACTCTAGGC CTCAGTCCAC TGTGAAGATT GGGTCTCTTT TTCAAGCATC TCCAAGCACA TGGGAAGAAA GCTTGCCTTC TGGTTCTAGA CAAGGGTTTC AATCGGGTCT TAAACGCAGG AGCTCAGTCT TAGATAATGA TATAGGATCT GTGGGCCCTG TAAGGAGGAT TCGTCAAAAA TCTAACCTTT CATCGCGAAG CTTGGCTCTG CCTGTTTCTG AGAGCCCACT TTCTGTCCGT GCCAATGGTG GAGAAAAAAC TACACATACA TCTAAAGATA GTGCAGAGGA TATTCCTGGT TCAAGTTTTA ACCTTGTTCC TACCAAGTCA AGTGAGATGG CGTCAAAAAT ATTGCAGCAA CTTGATAAAA TTGTTTCAAC GAGGGAGAAA TCACCAAGTA AGTTATCACC ATCCATGCTT CGGGGTCCTG CTCTCAAAAG CCTCCAGAAT GTGGAGGCGC CAAAGTTCTT GGATAATCTT CCTGAGAAGA AGGCAAATTT GCCAGAATCT AGTTATCAAA AGCAGGAAAT ATCTAGAGAA AGTGTCTCCA GAGAGGTTTT AGCTCCGAGT GAGAAGACTG GTGGTGCTGT TGATGGAACA AGCAAAATAG GTTCCAGTAA AGATCAGGAT ACGCGTGGTA AAGGTGTTTA TTTGCCTCTC ACTAATTCTT TGGAAGAGCA TCCTCCAAAA AAGAGAGCAT TTCGAATGAG TGCGCATGAG GATTTCTTGG AGTTGGATGA TGATCATGGT GCAGCATCTA CTCCATTTGA AGTGGTAGAA AAACAGAATG CCTTCAAAGG AGAGAAAAGT CATATCAGCA TGCCTAAAGG GGAGAAACCA CTTACTCCGT CAGATGCCAT GCCCTCTACA TCATATATTT CTAATGGTGA CGCCTCTCAG GGTACTTCTA ATGGGTCTCT GGAAACTGGA AGGAACAAGT TTGTTGCTTT GCCCATTGAA GCTGTTCAGC AAAGTAATAT GGCCTCTGAA CCAACTTCAA AGTTCATCCA AGGAACTGAG AAATCGAGTA TTTCTTTTGG CAAACCAACC ACAGAAGAGA AAGGTATCCC TCTGGAAGAG CCTAAAAAAC CTGCTGCTGT ATTTCCCAAC ATCTCCTCAT CACCGGCTGC AACTGGCTTA TTAAATCAAA ACACTGCTGC ATCTGCAGAC ATCAAGTTAG AAAAGACTAG CAGCACTGCT TTTGGAGTAT CTGAAGCTTG GGCAAAGCCA ACTGAATCAA AGAAAACTTT CAGCAACAAT GCTTCTGGAG TGGAGTCAAC TACCTCAGCT GCATCAACCC TCAATGGTAG TATATTCTCA GCTGGAGCAA ACGCTGTTAA TCCACCTCCG AGTAATGGCT CTCTTACTTC AAGCCCTTCC TTCCAACCTA CTATTTCAAA TATACCTTCG GAGAATTATG TGGGTGAGGT GCTGTCCGCT GTTCAATCTC TTGCTGCTAC TCACAATTCC TCTAGTATAT TTGGAAAGTT GCCTACCAGT AACGACAGCA ACTCACAATC AACTTCAGCA CCTCCCCTCT CTTCTACATC ACCTTTCAAG TTTGGGGAAC CTGCAGCTCC ATTTTCTGTG CCAGCAGTAT CTACATCTAG CAGTCAGATC TCAAAGGAGA CTGAAGTTAA AAACGCCACA TTTGGAAATA CAAACACTTT CAAGTTTGGA GGTATGGCTT CAGTAGACCC GGGCACTGGC AGCGTTTTTG GTGCTAAATC TGGAGAAAAT AAAAGCACAC CAGGTTTTGT GTTTGGGAGC TCATCTCCTG CTGTGGCAGA TGCAGGTAAT AATATCTTCG GTGGGACATC CTCTGTGGTT GGTGGGAGCA CATTAAACCC TTCTACTGCT GCAGCTTCGG GACCTGAGAG CTCTGGAAGT TTAATATTTG GTGTGACATC TTCCTCAACC CCTGGGACAG AGACCAGCAA ATTTTCTGCG AGTTCTACAG CTACTAATAC TGGAAATAGT ATATTTGGTA CTTCCTCTAC CGCATTTACA AGCTCTGGTA GTAGCATGTT TGGTGGTGTA GCTGCAAGTA CTGGAAGCAG TGTTTTTGGA TTCAATGCTG CTTCATCAGC TTCTACTGCT AGCTCTCAAT CCCAGGCCTC AAATCTTTTT GGTGCTGGAA ATGCTCAGAC GGGTAATACC GGGAGCGGAA CCACAACATC AACTCAAAGC ATCCCCTTTC AGTTTGGTTC ATCTGCATCA GCTCCTTCAT TTGGTTTGTC TGGGAACTCT TCTCTTGCAT CAAACAGTTC TCCATTTGGG TTTTCAAAGT CGGAACCTGC TGTATTTACT TCTGGCTCAA CTCCTCAGTT GAGTTCGACA AACACCTCTG CAAGCTCTAG TGGTACAATG AGCTCTCCCC TATTTGGGAC AAGCTGGCAA GCTCCCAACT CTGCTCCAAA CTCTGCTCCA GTCTTCAGTT CCTCGTTCAC CACTTCTTCA AATCCTACCT TTTCCTTTGG AGGATCTTCT GCTGCTACTG CTTTGAGCAC TCCAGCTCCC ATTTTTGGTG CATCTACCAA CACCCCGTCA CCTTCGCCTA TCTTTGGTTT CGGCTCAACC GCTCCTACCA CTCCCCAGCA GCCGGTATTT GGTAACTCAG CGACTCCATC ACAGTCTCTG TTTGGTAACT CAAATCCTGG GTTTGCATTT GGTGCAGCTA ATAATACAAA TGGTATCAAC AATAACCAAC AAGTGAGCAT GGAAGACAGT ATGGCAGAAG ACACAGACCA AGCTAATAAA GCATCCATGG CATCCCCAAT GTTTGGACAA GCAGCTGTCT CGATACCTCA ACCAAACTTT GCCTTTGGTG GAGGAGCAGC AACGCCGCCT CCATCAATGG CTAACCCGTT CCAGTTTGGA GGCCAACCGA TGGGAAGCAC GTCACAGAAC GCATCACCTT TCCAGGCATC ACAGAGTCTA GAGTTCCAAG GAGGGGGGAG CTTTTCACTA GGCAGCACTG GAGGCGGAGA TAAGTCAGGC CGCAGAATCT TCAAAGCAAA GAAATCCAAC AGAAAGAAAT AA |
| Length | 3972 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 4011379.. 4016705 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G10650.1 |
| Description | |
| TAIR curator summary | |
| Alias | [AtNUP1][NUP1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3.31662 |
Ahg949937 | NADH-dependent glutamate synthase 1 |
| 8.48528 |
Ahg329195 | modifier of snc1 |
| 9.16515 |
Ahg482274 | MOS4-associated complex 3B |
| 12.3693 |
Ahg329795 | G2484-1 protein |
| 15.3297 |
Ahg475161 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| 15.8745 |
Ahg488411 | ARM repeat superfamily protein |
| 18.3848 |
Ahg483345 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 19.6977 |
Ahg477251 | Pre-mRNA-processing-splicing factor |
| 22.3159 |
Ahg919375 | |
| 25.7488 |
Ahg943403 | C2H2 and C2HC zinc fingers superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|