Detail



ID : Ahg475161

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|475161|fgenesh2_kg.2__291__AT1G61660.1
Sequence
ATATATATAA ACTTTGACCT TCGTATAGCA ACGATCTAGT AGAAAGCATA TATATACTAA AACTTTCTGA TTCTCTCTAT ATGGCGGATG AGTTTCGAGC GACGGCTGCG ATTTGTGGTG GCGGAGGTGG CGCGTGGTGG AACTCACCAA GGAGCGTTAT GTCTCCTTCG GATCATTTCT TGTCACCTTG TTTCGGAGCT TCTATTACTT CCGATGATTT TACCTCGCAA GAGAATAATC TCAAAGCTAG GGTGACTAGT ACGGACAACA ACAACAACAA CAACATCGTT TTCGGGCAGC GAGAGGCGGA TTCTGACAGT GGAGGAAGTA CCGTGACGAT GGATTCGACG TTGCAGATGA TGGGTCTAGG GTTTTCTTCA AATTCTTCTT CAGATTGGAG CCAAACCATT TTACAAGAAG ACTTAAACTC AAGCTTCATA AGGAGCTCAC AAGATCAAGA TCATGGCCAA GGATTCTTAT CCACAACTAC TTCACCTTAT ATACTTAATC CAGCGTGTTC TTCATCTCCA TCAACTTCTT CTTCCTCGAG CTTGTTACGA ACCTTTTACG AACCCGAACC AAGTCCATAC AACTTTGTCT CTACCACAAG TTGTTCAATC AACGATCATC AACTTTCTTG GGCTAATAAG ACAAATCCTC ATCATCAAGC TTCTTATGGA TTAACTAACA ACTTCTCTAA CAACGCAAAC TCTCGACCCT TTTGGAGTTC TTCATCAACC ACTAACTTAA ACAACACGAC GCCAAACAAT TTTGTAACCA CTCCGCAGAT AATATCTACT CGTTTAGAGG ACAAAACCAA GAATCTGAAG ACAAGAGCTC AGAGTGAGTC TTTGAAGAGG ACAAAGGATA GTGAATCTGC GGCGAAAAAA CCGAGAGTCA CCACGCCTTC ACCGTTGCCA ACTTTCAAGG TGAGAAAAGA GAATCTAAGG GACCAGATTA CTTCATTACA ACAACTAGTT TCACCTTTCG GAAAGACAGA TACTGCATCT GTTCTCCAAG AAGCTATAGA GTACATCAAG TTCCTTCATG ACCAAGTCAC TGTTCTAAGC ACTCCATATA TGAAACAAGG TGCCTCGAGC CAACAACAAC AACAACAGAT ATCTGGTAAG TCGAAGAATC AAGATGGAAA TGAGAATCAC GAACTAAGAG GACATGGTCT ATGTCTCGTC CCAATATCAA GCACGTTTCC GGTGGCTAAC GAAACAACAG CCGATTTTTG GACGCCAACG TTTGGGGGCA ACAATTTCAG GTAGGTGATT AAAGAGAGAG GATTATGGTT GTCAAGACGG ATGGGAACAT ATGCTAAATT CAGCTTGGAG ACTCTAAAGC ATAACAATAA TTTTTATGTA TTTTCTTCTT CTTTTTATTT CAATATTTTA AGGGAGGGTT TTATTGCTGA ATTTAGCAGA TATGGGTTGT TTTTATGTAG AATAACCTTT TGTTCCTGTC ATTGTTCTTG AATATATATA TATATACATA TTTTTGCCGT TGGTGCCATC TTTGTTAACC ACTTATTAAA GTTAAAGAAC ATAATAATTG GTGGTTTGTC ATATG 
Length1575
Protein Sequence
Protein Residue
Map Locationscaffold_2: 2182854.. 2185455
Download Sequence
A.thaliana
AGI-codeAT1G61660.1
Descriptionbasic helix-loop-helix (bHLH) DNA-binding superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1.41421 Ahg475755 Cytochrome P450 superfamily protein
4.47214 Ahg472806 decapping 5
6.63325 Ahg949937 NADH-dependent glutamate synthase 1
9 Ahg924165 LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein
10.7238 Ahg933950 NAD(P)-binding Rossmann-fold superfamily protein
11.225 Ahg893360 Protein of unknown function (DUF1421)
12.1655 Ahg924173 hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase
12.6491 Ahg484193 ammonium transporter 1;1
14.1421 Ahg493199 acyl-CoA oxidase 1
15.3297 Ahg903949
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression