Detail



ID : Ahg904852

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|904852|Al_scaffold_0003_1980
Sequence
ATGTCATCTT CACACAACAG GAGTAACAAC AATTCAGAAG GTGCTAAAGC AGAACAAATC ATATTTGAGT TCTTTGCTAA AAGCCTTCAC ATCATTCTCG AGTCAAGGAC TCCTTTTATG TCTTCAAGGA ATTTTAGTGG TGACCAGATG ATTTGTTCTC CTTCCTCATC TTCTTCCTCT TCCTCGAGTG TCAGGCCTCG CGACAAATGG TTCAATCTAG CTCTTAGGGA ATGCCCTGCA GCGTTAGAGA GTTTTGATAT CGGGCGGAGA AGTAGTCTTG AGCCTTTGGT TGTTGATGTG GTTCTTGTGG TGAGGCCGCT TGTTGGTGAT CAGATGAACT TGTCTGGTAA AAGGGAGCTT ATCAGGAATT TTTCCGGGAA AGATTATCAG TCGGGTTGGA ATTCTGATCA AGATGAATTG GGATGTGAAG CTAAGAACGA GCAGATTATT GAGAGATGGG TGGTGCAGTA TGATAATAGG AAGATCAGGG AATCTGTTAC TACCAGTAGC AGGAGGTCAA GCAGTAATAA GTTGCAAGTG ATGTATAAGA AAGCTACTCT GCTGCTTAGA TCATTGTTTG TGATGGTTAG GCTTTTACCT GCTTATAAGA TTTTCCGGGA ACTTAATTCC TCAGGGCAGA TCTTCAAGTT CAAGCTTGTT CCCAGGGTTC CCTCTATTGT TGAGCCATTC ACTCGTAGAG AAGAGGCAGA AATGCAGAAG TTTTCTTTCA CACCGGTTGA AACTATCTGT GGTAGACTTT GCTTATCGGT TTTATATCGT TCTCTTTCCG ATGTCAGTTG CGAACACTCA ACTCCTATGT CTCCAACATT TATAACCGAT TATGTTGGAA GTCCCTTGGC TGATCCTTTA AAGAGGTTCC CTTCCCTTCC TCTTTCATAT GGTTCTCCTC CATTGCTGCC ATTTCAAAGG CGACATAGCT GGAGTTTCGA TCGTTACAAG GCATCCCCAC CTTCTGTTTC TTGCTCACCA TCGCCTACAC GCTCAGATTC ACATGCATTG GTTTCACATC CTTGCTCCCG TCACCTTCCT CCTCACCCTT CTGATATACC CACTGGTCGT AGGAAGGAAT GCTATGCTGA AGGATATCCT CCTTCTCAAG ATTTCTCCCC TCCTCCTTCT CCTTCAGCAC CAAAACACGC CGTCCCAAGA GGCATCACAC GTACTGAAAG TGCTCCAGTC AGAATCCCAG CTCCAACTTT CCAGCCCAAA GAAAACGTTG TGGCACCTTC TGCTCATCTG AAATTGTCGA GACACCCTTC GTTGAAGCCT GTGAGAAACT TGGGTCCTGG TGAATCTGGA GGAGCAATAG ATAAGCTGTT TCTTTATGGG AGAGATGACT TTAGAAGAAA TTCTGGGGTG AGGCCGTCTG CCAACAGCTC ACCGCGGATA TCATTTTCCC GGAGTTCCAG TAGATCTTTC CAAGACGATT TTGATGATCC TGATTTCCCT TGCCCATTTG ATGTTGAGTA TGATGATATT ACAGATCGTA ATAGCAGACC AGGGTCGTTC GACCACAGAG GAGACATACA CGAACCACTC GATTCAAGTG GGTCATACCC GAAGAAGTCC CAAGATGCTG CAGTTGGTGC CCTTGTGAGA ATGCTGAAGA AAGCTCCTCC TCTCAGACAA GATGTCTCTG AATCTTCCAT ACCTGAAATT TGCTGGAACA ACAACAACAG CAACAAACCA GCAGGGGCTC ACGAGATAGC AGTAGCGTCT ATCACAGCCT CGGGGATTGC TCTGGCCTCA AAGACAACAG CTGATGCATT GGAAGAGTTG AGGTCTTACA AAGAAATGAA GAATCATTTG TTGCTTAGTC AATCCACATC AAACCCTTCC TCGGTTACTA CTTCACCTTT TGAAGTTTGA 
Length1890
Protein Sequence
Protein Residue
Map Locationscaffold_3: 7595746.. 7598036
Download Sequence
A.thaliana
AGI-codeAT3G18770.1
DescriptionAutophagy-related protein 13
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
16.9411 Ahg471776
19.7737 Ahg923840 Ubiquitin-conjugating enzyme family protein
24.3926 Ahg477069 histone acetyltransferase of the CBP family 1
40.4722 Ahg477894 long-chain acyl-CoA synthetase 6
42.4264 Ahg475351 Disease resistance protein (CC-NBS-LRR class) family
44.4747 Ahg951404 Pentatricopeptide repeat (PPR) superfamily protein
45.6946 Ahg913087 PLATZ transcription factor family protein
48.9898 Ahg496783
50.5964 Ahg897990
51.0882 Ahg479191 ubiquitin protein ligase 6
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression