| Annotation |
|---|
| Description | jgi|Araly1|477069|fgenesh2_kg.2__2199__AT1G79000.1 |
| Sequence |
AAAAAAAAAT CAAAATCCCC AAATCGAGCG AGTCCAAAGA AAAATCCCCA ATTCGACGAG CCCAGAAAAA TCCCCCGATT AGGGAAAACC TGAATTCGTT CGCTTTTGAT TATCCGTCTT CTTTCAGGGA TTTGTTGACC TGCTTGATCC TAATTTCTAA CCTCGCTTTT GGTTTGAGTT CACACGTGCC GCATCGGCTG TTCACCGACT TTGTTTCCAT TGTGCAGAAT CCAATCATCG TAAAATCACT AGCAACCGCA GGACAGTCTA AGGTGCTCTA ATCAGGAGAT GAAATTTGGA TACGGTGACT TCTGGAGGAG AGGAAAGTTA TGCACTGTTT GTTACTGTTA GTTACCAGAA GAACTAGGAC AAGGCGACGG AGACTGAAGA GATAACTATG AATGTTCAGG CTCACATGTC GGGACAGATA TCTGGCCAGG TTCCAAACCA AGGAACCATG TCCCAGCAAA ATGGGAACTC CCAAATGCAG AATTTAGTTG GTGGTGGTGC AGCTCCTGCT GGTGCTGGTT TAGGACCTTC ACGTGTTTCT CCCGTTGACA ATGACATCTT GAAACTTCGG CAGGCCATGC GAATCAGGAT TTTCAATATC TTACAGCAAA AACAACCATC TCCAGCTGAT GAAGCATCAA AAGCAAAATA TATGGATGTT GCTAGACGCT TAGAAGAGGG GCTGTTTAAA ATTGCTAACA CAAAGGAAGA TTACGTGAAC CAGTCAACCC TTGAACCTCG GCTGGCAAGT CTAATCAAAG GCAGGCAGTT AAATAACTAC AATCAGCGAC ACGCTAATTC TTCTTCGGTT GGAACAATGA TACCTACTCC AGGATTACAA CACAGTGGGG GGAATCCTAA TTTGATGATT ACTTCCTCAG TAGATGCTAC AATGGCTGGA AGTAATAACA TCATAACTAG TGCTATGAGC ACTGGAAACC TGCTAAATCC TGGTGGCATG CTCGGAGGTA ACCTATCTAA TGGATACCAG CATTCATCGA GTAACTTTGG TCTTGGTTCT GGTGGGAACA TGTCATCCAT GAGCTCCCAG AGAAATACTG GCCAGATGAT GCCTACCCCT GGATTTGTCA ACAGTAGTAC AAATAACAAC AGCAATAATG GCCAGTCTTA CTTGAGTGTT GAAGCTTCCA ACAATAATGG TGGATTTTCT GCTGCTCCCA TGATGGTACC TCAGACTCAG CAGCAGCAGC AACAGCAACA GCAACTGAGG CAAGATATTG GTGGCCAAAA TAGTCGTATG CTGCAAAACC ATGGAAGTCA AATGGGTGTT GGCCTTAGAC CTGGAATGCA ACAAAAAATG TCTAATGTGT CTAACAGCTC CATAAATGGT GGTGTTGGAA TGAATGCAAA AAGCGTAGAT TCAGGTACAT CGTACACTAA TCCTACCAGA AATTCACAGC AGGCTTATGA TAACCTTCAG CGTTCAGGAA TGCAGGGTGA AGGATATGGC ACAAACAACT CTGACCCATT CGGATCGGGA AATTTGTATG GTGCTGTAAC ATCTGTTGGG ATGATGACAA ATACTCAGAA TGCCAATACA GCAAGTTTCC AGTCTGTGTC TAGAAGTAGC TCTTCTTTGT CACATCAACA GCAGCAGTTT CAGCAACAGC CTAATCGGTT TCAGCAACAA CCTAATCAAT TTCACCAACA GCAGCAGCAG TTTCTTCATC AACAGCAATT GAAGCAGCAA AGCCAGCAGC AACAGAGATT TATAAGTCAC GATGCTTTTG GGCAAAATAA CGTGGCTTCT GACATGGTTA CTCACGTTAA ACATGAACCT GGAATGGAGA ACCCTAGCGA GTCTATCCAC CCCCAAACTC CTGAGCAATT TCAGCTTTCT CAGTTTCAGA ATCAATACCA GAACAATGCA GAAGACCGTC ATGGAGGTTC TCAGATTCTC CCTGTCACTA GTCAGAGTGA TATGTGCACA TCAGTTCCTC AAAATAGCCA ACAGATACAG CAGATGTTGC ACCCGCAGAG TATGGCTTCA GACTCTATCA ACGGTTTTAG CAACCTCTCT GTTGGAGTGA AAACAGAATC TGGGATGCAT GGTCACTGGC AATCTCAGTC ACAGGAACAT ACTCAAATGT CTAATAGTAT GTCGAACGAA CGGCACATTC AGGAGGATTT CCGTCAAAGA ATGTCTGGAA CGGATGAAGC TCAGCCCAAT AATATGTCTG GAGGCTCCAT CATAGGTCAA AATCGTGTCT CCACTACATC AGAATCCCTT AATCCCCAAA ATCCTACTAC TACCACTTGT AGATATGGAA ACGGAAACCG GGATCCGAGA TTCAGAAATC AACAGAAATG GCTCCTCTTT CTACGCCATT CTCGCAACTG CAAAGCGCCT GAAGGGAAGT GTCCCGACCG AAATTGTGTT ACGGTTCAGA AGCTTTGGAA ACACATGGAC AGTTGTGCTG CACCTCAATG TTCATATCCT CGTTGCCGCC CCACAAAGAC ATTGATTAAT CACCATCGAA ATTGTAAGGA ATCTAACTGC CCTGTCTGTA TTCCTGTGAA GGCCTACCTA CAGCAACAGG CAAATGCACG GTCCCTTGCT CGTTTAAAAA ATGAAACCGA TGCAGCCAGG TCAGTGAATG GTGGAGGAAT ATCAAGTGAT ACTGTACAGA CCTCTGCTGG AGCAATATCT TGTGCTTCGC CTGGTGCTGC TATTTCAGAT CATTTGCAAC CTTCATTAAA ACGGTTGAAG GTGGAGCAGT CTTCTCAACC TGTGGATGTT GAGACAGAAA GCTGTAAGAG CTCAGTTGTT TCCGTAACAG AAGCACAATC ATCTCAGTAC GTTGAAAGAA AAGATCATAA GCACAGTGAC GTACGTGCAC CTTCAAAGTA TTTTGAAGTG AAAGCTGAGG TTTCTGATGT TTCTGTCCAG ACACGACCCG GATTCAAAGA GACAAAAATT GGAATTACTG AAAATATTCC CAAGCAAAGG CCTGTCAGTC AACCTGATAA ACAAGATTTG TCTGATGTCT CACCTAGGCA AGAGAATACC AAAGTGGAGA AAGAACCTGA ATCACTTAAG AAAGAAAATC TGGCAGAGTC TACTGAACAT ACATCAAAAT CTGGAAAACC AGAGATAAAG GGTGTTTCAT TAACTGAATT GTTCACTCCT GAACAAGTGA GAGAACATAT CCGTGGTCTC CGTCAGTGGG TTGGCCAGAG TAAAGCCAAA GCAGAAAAGA ATCAGGCAAT GGAGCATTCA ATGAGTGAGA ATTCCTGCCA ACTATGTGCA GTGGAGAAGC TTACCTTTGA GCCACCACCT ATTTATTGTA CCCCTTGTGG TGCTCGCATC AAGAGAAATG CTATGTATTA CACCGTAGGA GCTGGTGACA CTCGTCATTA CTTTTGTATT CCATGTTATA ATGAATCCCG TGGGGACAAT ATACTCGCCG AAGGGACGCC TATACCTAAG GCAAGACTCG AGAAAAAGAA AAATGATGAA GAGACTGAAG AATGGTGGGT CCAATGTGAT AAATGTGAGG CGTGGCAGCA TCAGATATGT GCTTTATTTA ATGGGCGAAG GAATGACGGA GGGCAGGCTG AGTATACCTG CCCATATTGC TTTATAGCAG AAGTGGAGCA AAGTAAGAGG AAGCCTTTAC CTCAGAGTGC TGTTCTTGGA GCTAAAGACC TACCGAGAAC AATTCTCAGT GACCATATAG AGCAGCGGTT GTTTAAGAGG CTGAAGCAGG AAAGAACAGA GAGAGCCAGG GCTCAAGGAA AAAGTTATGA TGAGATTCCC ACTGCCGAGT CCCTTGTGAT TAGAGTTGTT TCATCTGTTG ACAAGAAGCT GGAAGTCAAA CCTCGATTTC TTGAAATTTT TCGGGAGGAT AGTTACCCAA CAGAATTTGC ATACAAGTCC AAGGTAGTTC TGTTGTTTCA AAAGATTGAA GGTGTAGAAG TATGCTTATT TGGGATGTAC GTCCAAGAAT TCGGTTCTGA ATGCGCATTT CCCAATCAAC GCCGAGTATA TCTCTCGTAT TTGGATTCAG TCAAGTACTT CAGACCCGAG GTTAGATCTT ATAACGGAGA AGCTCTGCGT ACTTTTGTTT ACCACGAAAT TCTGATTGGC TACCTAGAAT ACTGTAAGTT GCGTGGTTTC ACGAGCTGCT ACATATGGGC TTGTCCGCCG CTGAAGGGCG AGGACTATAT CTTATATTGT CATCCAGAAA TTCAGAAGAC GCCAAAATCT GATAAACTAC GAGAGTGGTA CTTAGCAATG TTGAGAAAAG CTTCAAAGGA GGGCATTGTT GCAGAAACTA TAAATCTATA TGACCATTTT TTTATGCAAA CTGGTGAATG TAGAGCTAAG GTTACAGCAG CTAGGCTCCC GTATTTTGAT GGTGACTACT GGCCAGGTGC AGCGGAGGAT CTTATATACC AAATGAGTCA AGAAGAAGAT GGAAGAAAGG GAAATAAGAA AGGAATGCTC AAGAAAACCA TTACCAAAAG GGCTTTAAAA GCTTCTGGTC AGACTGATCT ATCTGGGAAT GCGTCCAAGG ATCTGCTGCT AATGCATAAA CTCGGTGAGA CCATTCACCC GATGAAGGAG GACTTTATCA TGGTCCACTT GCAGCCTTCT TGCACTCATT GCTGCATACT GATGGTATCT GGTAATCGTT GGGTCTGCAG CCAGTGCAAA CACTTCCAGA TATGTGACAA GTGTTACGAG GCTGAGCAGA GACGTGAAGA CAGGGAAAGG CATCCTGTTA ATTTTAAGGA TAAACATGCG CTGTATCCCG TTGAGATTAT GGATATTCCT GCAGATACGA GAGATAAAGA TGAAATACTC GAAAGCGAGT TTTTCGACAC TAGGCAAGCA TTTCTGAGTC TTTGTCAAGG GAACCATTAT CAGTATGACA CGTTGAGGCG GGCAAAACAT TCGTCCATGA TGGTCCTTTA TCATCTACAT AACCCAACCG CTCCTGCCTT TGTCACGACC TGCAATGCGT GTCATCTTGA CATTGAAACT GGTCAAGGCT GGCGCTGTGA AGTATGTCCA GACTACGATG TGTGCAATTC CTGTTACAGT AGAGATGGTG GAGTTAATCA TCCTCACAAG TTGACTAATC ATCCATCTTT AGCTGATCAA AATGCTCAAA ACAAAGAAGC AAGGCAGTTG CGAGTCTTGC AGCTTAGGAA AATGCTTGAT CTTCTGGTAC ATGCATCACA ATGTCGTTCG CCACATTGTC AATATCCTAA TTGCCGGAAA GTGAAGGGGC TGTTCCGACA TGGTATACAG TGCAAAGTAC GCGCTTCGGG AGGGTGTGTT CTATGCAAGA AAATGTGGTA TCTCCTGCAA CTCCATGCTC GGGCCTGCAA GGAATCCGAG TGCCATGTAC CTCGTTGCAG GGACCTGAAG GAACATCTTA GAAGATTACA GCAGCAATCA GATTCACGGC GAAGAGCAGC TGTAATGGAA ATGATGAGAC AAAGAGCTGC AGAAGTCGCT GGGGGCTCAG GTTAATAGAA AGTTGTACAT TTAGAAAAAT CAATTCAAGT TGCAAAAACC TTCATCCTTG TGCCGAAGGT AACAACTTCT GGAAGGAGGA GAAGAAGAGC CAGTTAGAGA GAGACTGATT GTGAAACTAG CGTAGGTTCG TAATTAACAG TCACGGGTCA GGGAATAACA CGCGAGCTTA AAACCAAAGA AGAAGAAGAA AAAGAGCAAA GCCAGACTTC TTCGCAGATC AGAGATTCAG GTTTGATTCT ATACATACAC ACGCACACAC TTGCTCTCAC TTTTTTTTGG TAATTTATTG TATTTTTGTA AAATTGCCAC TTCTGATTTG GGAGTGGCAA GTGTAAAATA CGTTAACGTG TTTTTCTTTT GTCTTTAGAT TCTCTTCCAC TCTCTTTT |
| Length | 5908 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 17410156.. 17418390 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G79000.2 |
| Description | histone acetyltransferase of the CBP family 1 |
| TAIR curator summary | Homologous to CREB-binding protein, a co-activator of transcription with histone acetyl-transferase activity. No single prior lysine acetylation is sufficient to block HAC1 acetylation of the H3 or H4 peptides, suggesting that HAC1, HAC5, and HAC12 can acetylate any of several lysines present in the peptides. HAM2 acetylates histone H4 lysine 5. A plant line expressing an RNAi construct targeted against HAC1 has reduced rates of agrobacterium-mediated root transformation. |
| Alias | [ATHAC1][ATHPCAT2][HAC1][PCAT2][ARABIDOPSIS HISTONE ACETYLTRANSFERASE OF THE CBP FAMILY 1][ARABIDOPSIS THALIANA P300/CBP ACETYLTRANSFERASE-RELATED PROTEIN 2][histone acetyltransferase of the CBP family 1][P300/CBP ACETYLTRANSFERASE-RELATED PROTEIN 2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1.73205 |
Ahg479273 | tetraticopeptide domain-containing thioredoxin |
| 2 |
Ahg319845 | nucleic acid binding;zinc ion binding;DNA binding |
| 2.23607 |
Ahg487351 | E3 ubiquitin ligase, putative |
| 3.87298 |
Ahg472338 | squamosa promoter binding protein-like 14 |
| 9.27362 |
Ahg476140 | |
| 11.8322 |
Ahg487009 | proteolysis 6 |
| 12.9615 |
Ahg340908 | glucan synthase-like 10 |
| 14.3178 |
Ahg937613 | SNF1-related protein kinase regulatory subunit gamma 1 |
| 15.4272 |
Ahg485388 | |
| 15.5563 |
Ahg477381 | SIN3-like 1 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|