Detail



ID : Ahg904952

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|904952|Al_scaffold_0003_2080
Sequence
ATGAGGGAGT GCATTTCGAT CCACATTGGT CAAGCTGGTA TCCAGGTCGG AAATGCCTGT TGGGAGCTTT ATTGCCTTGA ACATGGCATC CAGGTTCATG ATGAACATTT TGAAACTGGT GCAGGAAAGC ATGTTCCTCG AGCTGTCTTC GTTGATCTTG AGCCCACTGT GATTGACGAG GTCAGAACTG GTACATACCG TCAGCTTTTC CACCCTGAGC AACTCATCAG CGGCAAAGAG GATGCAGCTA ACAATTTCGC TCGTGGACAT TACACCATTG GGAAGGAGAT TGTTGATCTC TGTCTAGACC GCATCAGGAA GCTCACCGAC AACTGCACTG GTCTCCAGGG GTTCCTAGTA TTCAACGCTG TTGGTGGAGG TACTGGATAT GGTCTTGGAT CTCTGCTCCT TGAGTGTCTC TCTGTGGACT ATGGAAAGAA ATCCAAATTG GGTTTCACTA TGTACCCTTC ACCTCAGGTT TCAATATATG TTGTTGAGCC ATACAACAGT GTTCTTTCCA CCCACTCACT CTTGGAACCC ACTGATATCT CCATCCTTCT CGACAATGAA GCCATCTACG ACATCTGCAG ACGTTCCTCA GCATTGAGGA GGAAGGAGAG TTCTCTGAAG CTCGTGAGGA TCTTGCTGCT TTGGAGAAAG ACTACGAGGA GGTTGGTGCT GAGGGAGGTG ATGATGAAGA TGATAAAGGC TTGA 
Length714
Protein Sequence
Protein Residue
Map Locationscaffold_3: 8031200.. 8031965
Download Sequence
A.thaliana
AGI-codeAT1G50010.1
Descriptiontubulin alpha-2 chain
TAIR curator summaryEncodes alpha-2,4 tubulin. TUA2 and TUA4 encode identical proteins.
Alias[TUA2][tubulin alpha-2 chain]
Gene coexpression
MR
MR Locus Description
21.7256 Ahg493929 DegP protease 13
25.923 Ahg478323 Calcineurin-like metallo-phosphoesterase superfamily protein
29.7825 Ahg927887 MATE efflux family protein
30.6268 Ahg914583 Ubiquitin-like superfamily protein
44.7214 Ahg477942 Uncharacterised protein family (UPF0497)
55.4617 Ahg351609 Protein of Unknown Function (DUF239)
57.7581 Ahg943128
62.8649 Ahg473542 Avirulence induced gene (AIG1) family protein
63.7181 Ahg925156
64.8074 Ahg486273 TRAF-like family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression