Detail



ID : Ahg905234

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|905234|Al_scaffold_0003_2362
Sequence
ATGAATTCCA TGGAAAACAG ATCATTTTCG GTGATGCTCA AGACGAGAGC TTCAGAAGGA GCTTCCGATC GTCATCCATC ACAGCTCAGG TTTTACTTTA ATTGCAGCTT TAGCTGTACC AATGCCACGA TCAAGAAATT CAGAGATGCA TTGGCAAAGC ATGGTCCAGA TAGGTGCAGC CTTGGACGGA CTAAAGGCCT TGAAGAGAAA GAGCTTGTGG CACTTGCAGC CAACAAAGAT CTCAACTTTA CTTACACACC AAAGCCTGTA CCAGTTGAGA AAGAAGCAGC CACTCCTAAT TTAAACCCAA GTCTCCCTAG CTTCCGACTC ATTCTTAGCA AAGCATTTCG AAGAGAGTGT ACTGCTTAA 
Length369
Protein Sequence
Protein Residue
Map Locationscaffold_3: 9235434.. 9236131
Download Sequence
A.thaliana
AGI-codeAT1G08570.1
Descriptionatypical CYS HIS rich thioredoxin 4
TAIR curator summaryEncodes a member of the thioredoxin family protein. Located in the chloroplast. Shows high activity towards the chloroplast 2-Cys peroxiredoxin A, and poor activity towards the chloroplast NADP-malate dehydrogenase.
Alias[ACHT4][atypical CYS HIS rich thioredoxin 4]
Gene coexpression
MR
MR Locus Description
1 Ahg345747 atypical CYS HIS rich thioredoxin 4
18.7617 Ahg319944
58.5064 Ahg473866 Granulin repeat cysteine protease family protein
66.9925 Ahg472406 DPP6 N-terminal domain-like protein
80.697 Ahg480836 H(+)-ATPase 1
87 Ahg477691 RmlC-like cupins superfamily protein
87.0287 Ahg338119 Disease resistance protein (CC-NBS-LRR class) family
91.1757 Ahg917356 oxidative stress 3
95.781 Ahg492888 Glycosyl hydrolase family protein with chitinase insertion domain
97.3961 Ahg931039 Ubiquinol-cytochrome C reductase hinge protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression