Detail



ID : Ahg907303

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|907303|Al_scaffold_0002_384
Sequence
ATGACGAGGT TTGCTTGTTT GCACCTCTTT ACCATGCTCT TGTTTACCAT GCTCTCAAGT TCAAGTTATG CAGTTATAAC GACAGAGAGT CCTTTGTCAA TGGGACAAAC TCTCAGCTCC GCTAATGAGG TTTATGAATT GGGGTTCTTC AGTCCTAATA ACACACAAGA CCAGTATGTT GGAGTCTGGT TCAAGGATAC CATACCTCGG GTCGTTGTGT GGGTGGCCAA TAGAGAGAAG CCCATTACAG ACTCCACAGC AAATCTAGCT ATAAGCAGCA ATGGAAGTCT TCTGTTATTT AATGGCAAAC ATGGCATTGT GTGGTCAAGT GGAGTATCTT TTGCTTCTAG CAGGTGTCGT GCAGAGCTTT TAGACAGCGA AAATCTAGTT GTCATAGATA TTGTTTCGGG AAGATTTATG TGGCAAAGCT TTGAGCATCT AGGTGATACT CTGTTACATA CCGCATCCCT GACATATAAC CTCGCCACCG CTGAGAAGCA GGTGTTGAAT TCATGGAAAA GTTACACCGA TCCATCACCT GGCGACTTTC TGGGCCAGAT TACACCACAA GTTCCATCAC AGGGGTTTAT TATGAGAGGA TCGACGCCTT ATTGGAGAAG CGGTCCATGG GCTAAAACAA GGTTCACTGG GATACCGTTT ATGGATGAAT CCTACACGGG TCCATTCACC CTTCACCAGG ATGTAAACGG GTCAGGATAC TTGACTTATT TTCAAAAAAA CTACAAACTT TCACGTATAA CTTTAACATC AGAGGGATCA GTAAAGATGT TTCGGGATAA TGGAATGGGC TGGGAACTAT ACTATGAGGC TCCAAAAAAT TCATGCGATT TTTATGGTGC GTGTGGACCA TTTGGATTGT GTGTCATGTC AGTTCCTCCA AAGTGTAAAT GCTTCAAAGG GTTTGTACCA AAATCCATTG AGGAGTGGAA AATGGGAAAC TGGACTGGTG CTTGTGTGAG GCATACCGAA CTAGATTGTT CTAAATGCCA CCAACGTTGC CTCCACAATT GTTCTTGCTT GGCATTTGCT TATATTAAGG GAATAGGGTG TCTAGTGTGG AACCAGGACC TAATGGACGC AGTGCAGTTT TCTGCAACAG GAGAACTTCT TTCCATTCGT CTTGCACGTT CTGAACTAGA TGGAAATAAG CGCAAGAAGA CCATTGTTGC TAGTACAGTG AGCCTGACCC TATTTGTGAT CTTGGGCTTC ACTGCGTTTG GTGTCTGGAG ATGCAGAGTG GAACATAACG CTCATATATC AAAGGATGCT TGGAGGAATG ATCTGAAACC ACAAGATGTC CCAGGTTTAG ATTTCTTTGA TATGAATACC ATTCAAAACG CCACAAATAA TTTCAGTTTA TCAAACAAAC TCGGACAAGG TGGATTTGGT TCAGTTTATA AGGGAAAGCT GCAAGATGGG AAAGAAATTG CAGTAAAACG GCTTTCTAGC AGCTCCGGAC AGGGCAAAGA GGAGTTCAAG AATGAAATAC TACTCATCTC AAAACTCCAA CACAGAAACT TGGTTCGGGT TTTGGGATGT TGCATTGAAG GAGACGAACG GCTATTGATT TATGAGTTTA TGGTGAACAA GAGCCTTGAT ACTTTTATCT TTGATTCAAG AAAAAGGCTG GAGATTGATT GGCCAAAAAG ATTTGATATC ATTCAAGGTA TTGCACGTGG ACTTCTCTAT CTCCACCGTG ACTCACGCCT CAGGGTAATT CACAGAGACC TGAAGGTCAG CAATATTCTT CTGGATGAGA AAATGAACCC AAAAATATCA GATTTTGGAT TGGCTCGGAT GTATCAAGGA ACCGAATATC AAGACAACAC TCGCAGGGTT GTAGGAACTC TAGGATATAT GTCTCCAGAG TATGCATGGA CTGGGATGTT CTCTGAGAAA TCGGACATCT ACAGCTTCGG AGTTCTGCTG TTAGAAATCA TCAGCGGAGA GAAGATCTCA AGATTCAGCT ATGGCGAAGA CGGAAAAACC CTTCTTGCAT ATGCGTGGGA ATCTTGGTCT GAAAATGGAG GAATTGATCT TTTGGATAAA GATGTTGCTG ATTCATGTCA CCCATTAGAA GTTGGGAGAT GTGTTCAGAT TGGTCTGCTT TGTGTACAAC ACAATCCTGC AGATAGACCA AACACACTTG AGTTGCTGTC TATGCTCACC ACAACATCAG ATCTTCCATC ACCAAAACAG CCCACATTTG CATTGCACAC GAGAGATGAC GAACCCCAGT TTAGGGATTT GAGTACCGTC AATGAGATGA CACAATCTTT GATCCTTGCG CGTTAA 
Length2316
Protein Sequence
Protein Residue
Map Locationscaffold_2: 2289190.. 2343733
Download Sequence
A.thaliana
AGI-codeAT1G61500.1
DescriptionS-locus lectin protein kinase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
14.2829 Ahg491481 Plant Tudor-like RNA-binding protein
19.0788 Ahg912308 transmembrane receptors;ATP binding
20.8806 Ahg945284 GPCR-type G protein 1
26.2869 Ahg311741 Tetratricopeptide repeat (TPR)-like superfamily protein
39.4968 Ahg482040 Plant protein of unknown function (DUF828)
48.9898 Ahg919426
52.6878 Ahg492370 Calcineurin-like metallo-phosphoesterase superfamily protein
71.7496 Ahg349957 FASCICLIN-like arabinogalactan protein 21 precursor
73.8918 Ahg934176
74.135 Ahg356455 Leucine-rich repeat (LRR) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression