| Annotation |
|---|
| Description | jgi|Araly1|907723|Al_scaffold_0002_804 |
| Sequence |
ATGCAGTTGC TTCAATTTCT ACTTTGCCAT CCAAGCTGGA ATGTTCGTAA AACAGCTTAC AATTCTGTTC CAAAGATCTT CCTCGCAACT TCACAGCTAG CCACTACACT TTTAGACGAG TTCTCGTATT TTCTTTCCAT AACTGGGGAC CAAATCGTTT CTTCTAGAAC CAGTGACGCA GATAATTTCG TGGATCATCA AGTTTCTTTC GTCCCTTCTG TAGAGGTTTT AGTGAAGGCT TTGATTGTCA TTTCATCGGC AGTAGTTACT GGACCTCCAT GCTCATGGAT TGTTCGAGCT ATATTCTGCT TGCATCATCC CAGCGTACTT GGTACTGGAA AAAGAAAAGA TGTTTGGAAG CATCTACAAG ATCTTCCCGA TAAACTGTCT CATGATATGC TCTCAGAGAC TGACATTAAG ACTGCTAATC ATTCTCTAAA GAAAGGATTG GCTGGTAGAG AAACTGCAAA TTTGGGGAGA AGGGACACTG CAAAGTTGAC CAAGGGACAC TACAAAGGAA AAACGGCAAA GGAAGAGTCA CGGGAACTGA TGCTCAAAGA GGAGGCCTCA ACACGGGAAA TTGTTCACAT GATACAAAAA AGTCTTTCGT TGGTGCTTCA TGCCCTTGGG GAAATTGGTC TTGCCAATCC TGTGTTTTGT CACAGCCAGT TACCTTTTTT GTTCTTGCCA AGATCCTTGG CTGCTCAGTT CCAGAAGTAC TTGCAGCTTG TTTTACCGGC CATTCTGGAT GGTTTTGCCG ATGAGAATGA ATCTGTTCAT GATGCAGCCC TGGGGGCTGG CCATATACTG GTGGAGCACC ATGATACAGC GTCTCTGCCT CTTCTTCTTC CAGCTGCGGA GGATGGTATT TCGATGATAA TTGGCATATC CGTCAAAGTT CTGTGGAACC TCTTGGGTAT CTATTGTTCA AGGTTAGAAA ATGAAAGAAT GTACTATTAT TCCGTCACTA CTGAAAAGTG TCTCAACACT TGTGGTTTTG ATGTTGCTAC TTTTTTGTCT ACCAATGTGG AAAGTGTTTG CAAGAGTCTA CTTGGACCAA TGGGTTTAAT GAGTCCTAAA ACTCCTGAGC AGCCAGCGGC AGTATATTCC TTGTCCACCA TGATGTCTCT TGCACCAGAG GTTACATTCA CAGTGTTTAA GATGCATCTA CAAGACCTTC CAGATCGACT GTCTCATAAT ATGCTTTCAG AGACTGACAT TAAGATCTTT CATACACCTG AGGGAATGCT TTTAAGTGAG CAAGGTATCT ATGTTGCTCA GACGATTGGT GCCAAGTACA CAAAGCAGGA GCCGGTACTT ACATGGGTTT ATTCTACTTA TTCTGTTTTA CACTTGAAAC ATGATTCCAC TTTTAGCATA TTGGATCTAA AGACATCTTC TTCTTATTGC TTGTTGAATC CAGGAAGGCA AGGAATAACC TTAGCACTGC AATCTGCTGC TGACAACAAA GGACCTTCCT GCTGTTATGA CCTTATTGAT ATCCCGCGCA CTGAAAATTG TATGAAACTG AGCGTTTTTC TCATATGCAG GCTGATCCCA ACACATATGT TCGTGGAAAG AGGATCAATG CTGGCATCTG ATGAAGAGGA ATATGACCTG GTTCGTGAGG GTGTTGTTAT ATTCACTGGA GCACTAGCAA ATCACTTGGC AAAAGATGAT CCTAAAGTCC ATAATGTTGT GGAAAAGCTG TTGGAGGTGT TGAACACACC ATCAGAATCT GTGAAACGAG CAGTCACAAC ATGCCCTTCT CCACTTGTGC TATCAAAGCA AGAGGATGCC CCTGCCCTTT TTTTGAGGCT CTTGGATAAG CTAATGAAGA GTGATAAATA TGGTGAGCGT AGAGGAGCAG CTTTTGGTCT TGCGGGAGTA GTTATGGGCT TTGGAATTTC TAGCTTGAAG AAATATGGTC TTATAGTCAC TTTGCAAGAA GCACTTAAAT TGACAGAGTT AAATAGTGTG GAGAAGAAGA AGAAGAATCT CTTCAGGCTA TGTCCGTTTT GGCAGAGGAG AAGCACCACT TCTTCATCTT CGTCTTCAAC ACAGGATCCA AACCAAAACT ACCGTAGCCG CCATGGACAT CGGAATACAG ATATTTCCGC CGTCTCTAAA CCTTCCTTGA CTATGTCTTC CGTCGCCAGA TCACTTCTTC CAGCTCGCCG TCGTCTTCGA CTAGATCCTT CAAGTTATCT GTATTTCCCT TATGAACCTG GTAAACAAGT GTGTAGCGCA ATCAAGCTTA AGAATACTAG CAAATCTCAT ACTGCATTCA AGTTCCAAAC AACGGCACCT AAGAGTTGTT ATATGCGTCC TCCCGGAGGT GTTTTGGCTC CAGGAGAGAG TGTTTTTGCT ACTGTTTTCA AGTTTGTGGA ACATCCAGAG AACAATGAAA AACAGAAGTT GAACAAGAAG AGCAAGGTTA AGTTTAAGAT TATTAGCCTG AAAGTTAAAC CAGGAGTAGA GTATGTGCCT GAGTTGTTTG ATGAGCAAAA GGATCAAGTA GCAGTGGAGA CAGGGCCTCG AGTGGTCGGG GAGGGTCTTG TCATAGACGA ATGGGTAACA GATAATTATA CCTATATAAG ATCTAAAATC TTTGAGCCAA AGGATATGTT TCGTTACATA GAATTGCTCC TTCCTGAGGT TAGAAAGACT TCTAATCATT CTCTAAAGAA AGGATTGGCT GGTAGAGAAA CTACAAATTT GGGGAGAAGG GACATTGCAA AGTTGACCAA GAAAGCTGAA AAAGGAAAAA CGGCAAAGGA AGAGGCAAGG AAACGGCAAA AAAGTCTTTC GTTGGTGCTT CATGCCCTTG GGGAGATGGG TCTTGCCAAT CCTGTGTTTT GTCACAGCCA GTTACAGTTT TACATATCCA TATGCTATAA AGCTACTTTT TTGGATCCAT TGCTGCGATC ACCTATTGTA AGTGCTGCAG CCTTTGAAAA CTTGGAGATG CTTGCAAGGT GTACAGTTCA GCCACTGTGT AACTGGGCTC TCGAAATTTC AACTTCTCTG CGCTTGACCG CGATTGATGA ACTTGATGCT TCATCTGATT TTCGTCCATC AATTGACAAG GATGGGAAAA CATATGAGGA CAACTATAAA TGGGGTACCC GTATCTTGTG TTGTTCCCGC ATATCAAGCA TCAGTTGGAC CTGCGTGAAT GAATTGTGTC TTGGATTGCA AGCAGCTGAT GTCGCTGCCG TTTCCAAATG CTCCCTTCCT CAGAAAGCCC GCTATGGTCA TGATTTGGGG ACTGATTATT CAGGAATATT TAAAGCACTT TCTCATATAA ATCTCAATGT CTGTTTAGCT GCAGCAGAAC CACTGGCTGA TGCTCTTTAT GAAAGCTCGA CATCAATCCA AGCTGATCCC AACAAAGATG TTCGTGGAAA GATGATCAAT GCTGGTAACG TGATTATTGA TAAGCATGGC AAAGAAAACG TTTCATTGTT GTTCCCCATC TTTGAAAATT ATTTAAATAA AGAGGGCCTT GAAGATAAAG CATGTAGAAC AAAGCAAAGC AGTGCACAGT TCCTCGGTGC TATGGCATTT TCTGCTCCTC AGCAACTGTC TCAATGCCTT CCTAGGGCTG TGCCAAAACT TACAGAGGCC TTAACAGATC CCAATGAGTA CACACGACAT TCTCTTGACA TCCTTCTTCA AAGCCAAAGG ATATGTTTCC TTACTGAGGT TCTTGTGGAT CCAATTCCTG AGTTACGTTC TGTTGCAGCG AGGGCTGTTG GGTCACTTAT TAGAGGAATG GGAGAGGATA ATTTCCCAGA TCTTGTTCCG TGGCTGTTTG AAACTCTAAA TTCTGATACA AGCAATGTTG AAAGATATGG GATACAATGC TCAGGGATTA ATTTTCAATA CGTCGATTTT CCAATACATC ATTGCATGAG TATTACGGTT ATAGCAGCTC TTGGGACAGA TTACTTTGAG AATATACTTC CTGACCTCAT TCGTCATTGT TCTTATCAAA AAGCATCAGT CCGAGATGGA TACCTTACGC TTTTCAAGTT CTTACCAAGA TCCTTGGGTG CTCAATTCGA GAAGTACTTG CAGCTTGTCT TACCGGCCAT TCTGAGTGAT CTTGCCCATG AGAATGAATC TGTTCGTGAT GCAGCCCTGG GGGCTGGCCA TGTACTGGTG GAGCACCATG CTATAACGTC TCTACCTCTT CTTCGTCCAG TTGTGGAGGA TGGTATTTTC AATGCAAATT TTGTTGAACT GCTTGGGGAT CTATTGTTCA AGCTAGCAGG AAGATCACTT GGAGAGCTGG TTAGGAAGCT TGGTGAAAGG GTGCTTCCTC TTATCATTCC AAAATTATCT AAGGGACTGA CCGACCCAGA TGTTGACAAA AGACAAGATG TATGCATTGG CCTGAATGAA GTGATGGCAA CTGCTGGAAG GAGTCAGTTG CTGAGTTTCA TGGATCAGCT CATTCCCACA ATTCGGACGT CACTTTGTGA TAGTGCTGGA TTGCAAGCAA TGGATGAAAT TATCCCAACT CTTCTGGAAG CCTTAGAAGA TGATGAAATG TCTACTACTG CCTTGGATGG ACTTAAACAA ATTATAAGGT TCTCTTCTAC TGTCTCCTCA GGCTCTTCTT CCCCTATGTT AGGACAGCAG CTGTTCTTCC ACACATCTTG TCCAAGCTTG TCCATCTTCC TCTCTCCCTT GGCTGAGGTT GCTGGTGCTG GTTTTAACAC GCATCTCGGG ACCATACTTC CTATTTTGCT CTCTGCAATG GGAGATGAAA ACAAGGAAGT CCAAGAATTG GCACAAGAGA GGGTGGTCCT TGTCATTGAT GAAGAAGGAG TTGAGAACTT CTCAAAGGAG TGTTTGTTTA GTAGCAAGCT TTACTTAATT GATGAAGCTC CAAACATGAT ATCTACCTTG ATTGTTATGC TCAGTGATTC TGATTCAACG ACTGTTACGG TTTCCTGGGA AGCTTTGGCT AAGGTTATCG GTTCAGTTCC AAAGGAAGTA CTTCCTTCAT ATATAAAACT TGTACGTGAT GTTGTATCTA CAGCTAGGGA CCAAGAGCGC ATGAAGCGGC TCTTGGATAA GCTAATGGAG AGTGATAAAT ATGGTGAGCG TAGAGAAGCA GTGTTTGGTG TTGAGAGAGT AGTTATGGGC TTTGGAATTT CTAGCTTGAC GAAATATGGT CTTATAGTTA CTCCGCAAGA AGCACTTATT GACATTTCAC ACCCTATGGA ACCTGGTTAT AATAGTCATT CTCTTGTTGT TTCTCTGTTA TGGAAACTGG CCTCAAAACT TTCAAGTGAT GATTGTGTAG TATGTGTCGA CCTTCTTGCG GTGCTCACAC TCCTCCAGAT CTTTCTCGCA ACTTCACAGC TAGCCACTAC TCTTTTAGAC GAGTTCTTGG ATTTCCTTTC CATAACTGGG GACCAGATCG TTTCTTCTAG AACCAGTGAA GGCTTTGATT ATCATTCAGT TGCTGGACCT TCTAGCTCAT GGATTGTTCG TGCCATATTT TACTTGCATC ATCCCAGCAT CGTTGGTACT AGAAAAAGAG ATGTTGTTTG GAAGAGATTG CAAAAGTGTC GCAAACCCCG TGGTTATGAT GTTGCTACTT TTTGTCTACC AATAGAGAAA GTGTTTGCAA GCATCTACAA GACCTTCCAG ATCAACTCTC TCCTGATATT ATGCTCTGAG AGACTGACAG TAAGGGATGA TATAGTAATT TGGGCGCAAA AGAAGACTGG TGCACCAATC ATTACACTTA ATTCAGTTGT TGAAGCTCAG AGATTTCTGA ACAAGTTTGA GGGTTCTGAA CATAACGAAT TCGTGAAAGC TGCAAAATCA GATGATGAAA TCCAGTTTTT AGAAACAAGC GACAACGATG TTGCGAAACT TCTAATTCCT GACCTTAAAA GCAGTAATGT GTTTATTGGG ATGGTTAAAA CTGAGGCTGA AAGGTACACT GTATATGATC ATTTTCCTGC TATCTATATC GTGAGAAGCG GTAACACCTG TCTGCAATGC AGATGGATCT TACAAAATGG AGAAGATATT GGAGCTTCTA GGCAGCAACA AGTTATGCTC TTCTCCAAGG CTGATGATTT TCAGAAACTT GCTCAGCCTC TTGAAGATAT TGCAAGAAAA TTTAAATCGA AGGAGTTGTG TTCAGGACTC GCTCATGGAG TTGTTTCACG CTACTATAAG TCAGAGCCAG TTCCATATAA TAGTTCTAAT CATTCTCTAC TCCACTCTAG TTTAAAGTTG ACTTCTGGTC CAAATGGATT GAGAGACTCA AAAATTAAGC ATTCAGGCAT GATGTTAATC AAGTTTTGCT CGGAGTCCAA CAGAATATTA AGAATAACCC CTGCGGAACC TGGTTATACT AGTCATTGTC TTGTTGTTCT TCTACCGTGG AAACTGTTAC TTCTCTTTCT AGTTTGCCAT CCAAGCTGGA ATGTTCGTAA AACAGCTTAC AATTCTGTTA CGAATATCTT CCTCGCAACT TCACAGCTAG CCACTACTCT TTTAGACGAC TTCTCGGATT TCCTTTCCAC CATAACTGGG GACCAAATCG TTTATTCTAG AACCAGTGAC GCAGATAATC CCATGGATCA TCAAGCTCCT TTCGTCCCTT CTGTAGAGGT TTTAGTGAAG GCTTTGATTG TCATTTCATC GGCAGCAGTT ACTGGACCTC CAAGCTCATG GACTGTTCAA GCCATATTCT GCTCGCATCA TCCCAGCGTA GTTGGTACTG GAACAAGAGA AGATGTTTGG AAGGTAATCT TGACATTGGT CATTCGACAT GATTGCAAAA GTGTCTCAAA ACTCGTGGTT ATGATGTTGC TACATGAGAA AGTGTTTGCA AGCATCTACA AGACCTTCCA GATCGACTCT CTCCTGATAT TATGCTCTGA GACTAACAGT AAGAGTCTAC TTGGACCAAT GGGTTTAATG AGTCCTAAAA CTCCCGAGCA GCAAGCGGCA GTATATTCCT TGTACACAAT GATCTTTCAA ACACCGGAGG GGATGATTTT AAATGAACAA GCTATCTATG TTGCTCAGAC GATTGGTGCC AAGTACACAA ACCAGGAGCC GGCTAGAGAA GCTGCAAATT CGGGGAGAAG GGACACTGCA AAGTTGGCCA AGAAAGCTGA CAAAGGAAAA ACGGTGAAGG AAGAGGCACA GGAAGTGATG CTCAAAGAGG AGATGCCCTT GAGGAGATGG GTCTTGCTAA TCATGTGTTT TGTAACAGCT AGTTACCTTT TTGAGAGAAT TATACACAGT CAGTGGCTGA ATCAGCAGAT GATATATGGC CATGGTCATG ATTTGGGGAC TGATTATTCA GGAATCTTTA AAGCACTTTC TCATATAAAT CTCAATGTCC GTTTAGCTGC AGCAGAAGCA TTGGCAGATT CTCTTCATTA A |
| Length | 7431 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 7043384.. 7064079 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G54110.1 |
| Description | membrane-associated mannitol-induced |
| TAIR curator summary | Encodes a highly polar protein with more than 60% hydrophilic amino acid residues that is associated with the plasma membrane. It has limited secondary structure similarity to VAP-33 from Aplysia, which may be involved in membrane trafficking. |
| Alias | [ATMAMI][MAMI][membrane-associated mannitol-induced] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 19.2873 |
Ahg487022 | Dof-type zinc finger DNA-binding family protein |
| 27.313 |
Ahg936157 | magnesium transporter 3 |
| 46.0435 |
Ahg477722 | Alba DNA/RNA-binding protein |
| 60.9508 |
Ahg487160 | GDSL-like Lipase/Acylhydrolase family protein |
| 61.7333 |
Ahg470092 | ARM repeat superfamily protein |
| 62.849 |
Ahg479503 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| 68.3301 |
Ahg477603 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 70.5124 |
Ahg889514 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| 84.463 |
Ahg324948 | HXXXD-type acyl-transferase family protein |
| 86.0814 |
Ahg481585 | Thioredoxin superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|