Detail



ID : Ahg908261

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|908261|Al_scaffold_0002_1342
Sequence
ATGGTGTATA TTCTTTTGTT AATAGCTTGG AGGATTAAAA ACATGACTAT TGCTTTCCAA TTGGCTGTTT TTGCATTAAT TATTACTTCA TCAATCTTAT GCATTAGTGT ACCCGTTGTA TTTGCGTCTC CTGATGGTTG GTCGAAACAA AAATGTTGTT TTTTCTTGTA CATCTTTATG GATTGGATTA GTCTTCTTGG TGGGTATCCT TAA 
Length213
Protein Sequence
Protein Residue
Map Locationscaffold_2: 11487063.. 11487275
Download Sequence
A.thaliana
AGI-codeATCG00300.1
DescriptionYCF9
TAIR curator summaryencodes PsbZ, which is a subunit of photosystem II. In Chlamydomonas, this protein has been shown to be essential in the interaction between PS II and the light harvesting complex II.
Alias[YCF9]
Gene coexpression
MR
MR Locus Description
3.74166 Virus2010
4.47214 Virus2095
12 Ahg895990 Transducin/WD40 repeat-like superfamily protein
15.7797 Ahg332331 Putative membrane lipoprotein
19.2354 Ahg901203 heat shock protein 60-2
21.2132 Ahg938582 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
21.9773 Virus1570
27.7128 Ahg492343
28.5307 Ahg943653 cysteine-rich RLK (RECEPTOR-like protein kinase) 41
30.6268 Ahg925533 chloroplast ribosomal protein S14
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression