Detail



ID : Ahg908324

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|908324|Al_scaffold_0002_1405
Sequence
ATGGCTCCCA AACCCAAAGA AAACCCTAAA ACCTCGAATC CAGCAATCGA AGATCTCTTC TCTTCCCTCA ATAAACATAT CAAGGGATCA CATATCCAGC GATCTGAATT TGAACAAGTC GTCAAGGTCG CTGATCAAGT TTTGTCGATT TTACCTTCCG ATGAGGATGC AATCCGATGC AAAGTTGTGG CTCTAATCGA AGCAAAAAAG TTCAATGATG CTCTCTCCGT TATTAACTTG TTCCAGAAGC TTCCAATGGA TCTAGGGTTT CAAAAGAAAC TAAGCAAGTC TAAGATTAAG TGGTTAGAGG TTAATCTAGT CGCGGCGTTG ATAGCAGCTG GAAAAGCTTC TCAAGTGCTA AAAGCATTGG AGAGTTTGAA GATCAAACCA ACGACTACTT ATCAATTGGC TTATAATACT GCTTGCTCTT TGATCGAAAA CAATGACTAT GCTGATGTTG AACAACTTTT GCTCACTGCC AGGAGTTATC TAACCTCTCA TTTGACTGTT GATTTTCCAA GTCTTGAAAC TCTCACTGAC GATAAATCTT CTGATCTGGC CTCAATTGCT GTTCAACTAG CATATGTTCA ACAGGTTCTT GGACAAACTC AAGAATCCAC CAGCTCTTAT GTAGACATTA TAAAACGTAA TCTGGGTGAT GAACTTACTA TTGCTGTTGC TGTGAACAAC CTTGTTGCCT CGAAAGGTTC CAAAGATATT TCTGATGGCT TGAGGAAGTT TGATCGGCTG AAAGAAAAAG ACTCCCAAAA TTTTCAGCTT TCTCAAGACC TCGATGCAAA GCTTTCACAG AAAAATAAGG AGGCTATATA TGCCAATCGC GCACGAGAAC TTTGTGCTGC ACTGCCCGGT ATGTTTCCTG AGAGGGTTGT TCCTACATTG CTTCAAGCTA CTGTTTTGGT GAGAGAAAAC AAGGCTGCCA AAGCTGAACA ACTTCTGGGA CAGTGTGCCG AAAAATTCCC GGAAAAGTCT AAGTTGGTTC TCTTGGCCAG GGCACAAATT GCTGCTTCTG CCAGTCATCC TCATGTAGCA GCAGAGTCCC TGTCCAAAAT ACCTGATATT CAGCATTTGC CTGCAACTGT TGCCACCATT GTCGCCCTCA AAGAGCGTGC TGGGGACAAT GATGGTGCTG CTGCTGTTCT TGATTCAGCA ATTAAATGGT GGTCGAATTC GATGACTGAG AGCAATAAGC TTAGTGTATT GATGCCGGAG GCTGCTGCCT TCAAGCTCAG GCATGGTCAA GAAGAGGAGG CTTCACGGCT ATATGAGGAG ATTGTAAAAA AACAGAGTAG CATAGATGCT CTGGTTGGTC TTGTGACTAC ACTTGCTCGT GTCAATGTTG AGAGAGCAGA AACTTATGAG AAACAGCTTA AGCCCCTACC AGGTTTGAAG GCGGTTGATG TGGATAACCT AGAAAAGACC TCTGGTGCAA AACCCATTCA AGGGTCTGCT GCTTCATCGA GTCAGGAAGA AGTGAAGAAA GAGAAGGCGA AGAGGAAGAG AAAGCCAAAG TATCCCAAAG GATTCGATCA GGCAAACCCA GGTCCACCCC CGGACCCTGA GAGATGGCTT CCCAGAAGGG AAAGGTCAAG TTACAGACCC AAGAGAAAGG ACAAGCGAGC CGCTCAAATC CGTGGCTCGC AGGGTGCGGT GACGAAGGTT AAACAAGAAG CAGCTCCTTC AACTTCAAAG TCAAACCAAG CAGCCAGTTC TAAAGCCAAT GCAGCTGCGC CTTCTTCCTC TAAGGCCTCA AAAAAGAAGT CTAGAAGATG A 
Length1791
Protein Sequence
Protein Residue
Map Locationscaffold_2: 11886811.. 11889099
Download Sequence
A.thaliana
AGI-codeAT1G67680.1
DescriptionSRP72 RNA-binding domain
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.74166 Ahg936653 Protein of unknown function (DUF185)
15.2315 Ahg933001 Protein kinase superfamily protein
28.2843 Ahg473847 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
38.2099 Ahg329829 Tetratricopeptide repeat (TPR)-like superfamily protein
40.025 Ahg490746 alanine:glyoxylate aminotransferase 2
53.0471 Ahg931910 Ypt/Rab-GAP domain of gyp1p superfamily protein
53.963 Ahg472789 BSD domain-containing protein
60.1997 Ahg471471 Actin-like ATPase superfamily protein
61.0901 Ahg920669 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein
65.1306 Ahg486329 citrate synthase 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression