Detail



ID : Ahg486329

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|486329|fgenesh2_kg.5__2321__AT3G58750.1
Sequence
GATCCAAGCT GAATAATCTT ATCACCGTTG ATCTTTGGAT AAACAATAGA TCCGTTTTCA AAACTCTTAC CCGTAGAGAA TAAAAATCTC AGCTACTACC AAAATTAGGA AATTCAGGAT ACAAAAGCCA AGTCACTTAC CGAAAGATTG TTTCTTCTTC TTCTTCTTCT TCGCTTCCTT CCTTTGAAAT TGAATTCAGA TTTTTATTTT TTGAGGGGAA AAATGGAGAT TTCGCAGAGA GTGAAAGCTC GATTAGCCGT TCTCACCGCG CATTTAGCGG TGTCTGATAC CGTCGGATTG GAACAGGTGT TGCCGGCGAT CGAGCCATGG TGCACATCGG CTCACATTAC CGCTGCACCG CATGGATCGC TTAAAGGAAA TTTGACGATC GTCGATGAGC GTACGGGGAA GAAATATCAG GTCCCAGTCT CAGAGCATGG TACCGTTAAA GCCGTTGATC TCAAGAAGAT AACGACGGGG AAAGATGACA AGGGGCTTAA GTTGTACGAT CCAGGTTACT TGAACACGGC TCCGGTTCGA TCTTCGATTT GTTACATCGA CGGAGATGAA GGAATCCTAC GTTATCGGGG ATACCCAATC GAAGAATTGG CTGAGAGCAG TACTTTTATT GAGGTTGCTT ATCTCCTCAT GTATGGAAAT CTGCCTTCTC AAAGTCAGCT AGCTGATTGG GAGTTTACGG TTTCTCAGCA TTCAGCTGTG CCACAAGGAG TATTGGATAT CATACAGTCC ATGCCTCATG ATGCACACCC AATGGGAGTT CTTGTGAGTG CCATGAGTGC ACTTTCTATC TTTCATCCTG ATGCAAATCC TGCTCTTAGT GGCCAAGATA TTTACAAGTC AAAACAAGTT CGTGATAAAC AGATTGTTCG TATTCTCGGA AAGGCACCAA CAATTGCAGC GGCTGCTTAT TTGAGGACGG CAGGCAGGCC TCCTGTTCTT CCTTCGGGCA ACCTTTCTTA TTCAGAGAAT TTCCTCTATA TGCTGGATTC AATGGGAAAT AGGTCTTACA AGCCTAATCC TCGTTTGGCT CGAGTGCTGG ACATCCTCTT CATACTGCAT GCTGAACATG AGATGAACTG CTCTACTGCT GCTGCTCGGC ATCTTGCCTC TAGTGGTGTT GATGTGTACA CTGCTTGTGC TGGAGCTGTT GGAGCGCTTT ATGGTCCACT TCATGGTGGC GCGAACGAGG CTGTGCTTAA GATGTTAGCA GAGATTGGGA CAGCTGAAAA TATTCCAGAT TTCATTGAAG GCGTGAAGAA CAGAAAGAGG AAGATGTCAG GTTTTGGACA TCGTGTTTAC AAAAACTATG ACCCCCGAGC AAAAGTCATA AAAAAACTGG CAGATGAAGT GTTCTCCATT GTTGGTAGGG ATCCTCTCAT CGAGGTAGCA GTTGCTCTAG AGAAGGCGGC ACTGTCTGAT GAATATTTTG TTAAGAGAAA GCTGTACCCA AATGTTGATT TCTACTCTGG ATTAATATAT AGGGCAATGG GATTCCCACC AGAATTCTTC ACAGTCCTAT TCGCAGTCCC GCGTATGGCT GGATACTTGT CGCACTGGCG TGAGTCGTTA GATGATCCTG ACACTAGGAT CATGAGACCC CAACAGGCCT ATACTGGAGT GTGGATGAGG CATTACGAGC CAGTGAGAGA ACGAACGTTA TCAAGTGATT CAGGTACGGA TAAGTTTGGT CAAGTTTCCA TTTCGAATGC ATCAAGAAGG CGTTTAGCTG GATCATCTGC CCTTTAGTCT CAATCCTACA ACACACCAAT AAAGAAGAAA ACATTGGGAT ACCTCTGGGA AAATAAGAGA GTCTCCTCAA CAACTGTGTT GTTTTCTTTC TTTTATAATT AAACACTTAA TAATACACCC TATTCTTATT GTTTGTCTGT TATTTAAAAC TTTATGATTT AATAATAATA AGACATGTAA TTCTGATAAA TTGGGCTTTT AT 
Length1972
Protein Sequence
Protein Residue
Map Locationscaffold_5: 17967198.. 17970578
Download Sequence
A.thaliana
AGI-codeAT3G58750.1
Descriptioncitrate synthase 2
TAIR curator summaryEncodes a peroxisomal citrate synthase that is expressed throughout seedling and shoot development.
Alias[CSY2][citrate synthase 2]
Gene coexpression
MR
MR Locus Description
2.64575 Ahg951350 acyl-CoA oxidase 2
4.69042 Ahg483989 Nuclear pore localisation protein NPL4
5.38516 Ahg487989 aspartate aminotransferase 3
5.56776 Ahg495531 flavodoxin-like quinone reductase 1
6 Ahg494587 Calcium-binding EF-hand family protein
6.32456 Ahg319530 maternal effect embryo arrest 14
6.48074 Ahg937667 AMP-dependent synthetase and ligase family protein
7.2111 Ahg470771 Transcription factor IIA, alpha/beta subunit
7.48331 Ahg952367 SPFH/Band 7/PHB domain-containing membrane-associated protein family
7.48331 Ahg474488 mitogen-activated protein kinase kinase kinase 3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression