Detail



ID : Ahg910891

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|910891|Al_scaffold_0001_1145
Sequence
ATGGGTCGTT TCCTTCTTAT TGTTACATTG TCTTTCTTCT CTTTGAGATT ATGTTTGGCT GGGGATGTTG TCTCGTTCTC TACCGAGCTC AAGGACTCGG AAACGCTCGT CTCCGATCGC AGCACTTTCA GGTTTGGTTT TTTCAGTCCA GTTAACTCCA CGAGTCGCTA CGCAGGGATA TGGTTCAATA AAATTTCTGC AGTGGCTTCC ATGGTTTGGG TAGCAAACAG AGGCAGCCCT ATCAATGACT CTTCTGGAGT GATTGTGATA GCCAAAGACG GGAATCTCGT GATTAAGGAC GGTCGCGGAC ATGTTCACTG GTCCACGAAT GTCTCACAAC CAGTAGCTGC TAACACCACA TATGCAAGGC TTCTGAATAC AGGGAACCTC GTACTGCAAG GAATTTCAAA CAGTGGGGAT AAGATTCTGT GGGAGAGTTT CGAGCATCCT CAAAATGCAT TCATGCCAAC AATGATACTT TCTACTGATG CAAGAACGGG AAGGAGCCTT AAGCTTAGAT CGTGGAATAA CCGTTCTGAT CCTTCGCCTG GACGCTACTC TGCTGGTATG ATTTCTCTAC CATTTCCGGA GCTTGCCATC TGGAAAGATG ATCTTATGGT GTGGCGTAGC GGCCCGTGGA ATGGTCAATA CTTTATTGGA CTACCAGAAT TGGATTTCGG TGTCAGTCTT TACGAGTTTA CCCTAGCTAA TGACAACCGA GGATCCGTCT CCATGTCATA TACTAATTAT GACTCGCTGT ATCATTTTTT CTTGGACTCC GACGGGTATG CGGTGGAGAA ATACTGGAGC GAAGTTAAGC AAGAATGGAG GACCGGGATA CTATTTCCAT CAAATTGTGA TATATATGGT AAATGTGGCC AATTCGCCAG TTGCCAATCC CGGTTAGATC CACCTTGCAA GTGCATTAGA GGGTTTGACC CGCGGAGTTA TGCAGAGTGG AACAGAGGAA ACTGGACTCA GGGATGCGTA AGAAAGAGGC CGTTGCAGTG TGAGAGACGA GACAGTAATG GAAGTAGAGA GGGTGATGGG TTTTTGAGAT TGAAAAAGAT GAAAGTGCCC AACAATCCAC AGCGATCTGA AGTCAGCGAA CAAGAATGTC CTGGAAGCTG TCTGAAAAAC TGTTCTTGTA CGGCTTACTT TTATGGCCAA GGGATGGGTT GTCTTCTCTG GAGTGGAAAC TTGATCGATA TGCAGGAGTA TGTGGGCTCT GGCGTTCCTC TTTACATCCG GCTGGCAGGT TCAGAGCTCA ATAGATTTCT CACCAAATCT TTCATAGAAT CCTCAAGCAG TCGATCACTT GTGATCGCAA TCACGTTGGT AGGGTTCACA TATTTTGTCG CTGTGATTGT TCTCTTAGCA CTGCGAAAGT TGGCAAAGCA TAGAGAGAAA AACAGAAACA CAAGGGTACT GTTTGAGAGG ATGGAAGCTT TAAATAATAA CGAGTCTGGA GCAATACGTG TGAATCAAAA CAAGCTTAAA GAGCTACCAT TGTTCGAGTA TCAAATGTTA GCTGCAGCAA CTGAAAATTT CGCTATCACA AACAAGCTCG GGGAAGGAGG CTTTGGTTCC GTTTACAAGG GGAAATTACG AGAAGGGCAA GAGATCGCTG TGAAGAGGCT CTCACGAACG TCTGGACAAG GACTCGAAGA GTTTGTGAAT GAGGTGGTCG TGATCTCTAA GTTGCAACAC CGGAACCTCG TCAGATTGCT TGGATTCTGC ATAGAAGGAG AAGAAAGGAT GCTGGTCTAT GAGTTTATGC CAGGAAATTC TTTGGATGCA TATCTATTTG ACCCGGTGAA GCAAAGACTT CTTGACTGGA AGACGCGGTT TAACATAATC GATGGGATTT GCAGAGGTCT GATGTACCTT CACAGAGATT CAAGACTGAG GATCATACAT AGAGATCTAA AGGCCAGCAA TATCTTGTTA GATGAAAATC TAAACCCGAA GATATCTGAT TTTGGGCTCG CCAGAATTTT CCGGGGGAAT GAAGATGAAG CAAGCACCCT AAGAGTGGTT GGAACATACG GTTATATGGC ACCCGAATAC GCACTGGGAG GGTTATTCTC GGAGAAATCC GATGTTTTCA GCTTAGGAGT CATACTCTTA GAGATTGTGA GTGGGAGAAG AAACTCAAGC TTCTACAATG ATGAGCAGAA TCTAAATCTT TCAGCTTATG CATGGAAACT ATGGAACGAT GGGGAAATTA TCGCTCTTGT GGATCCAGTC AACCTTGACG AGTGTTTTGC AAATGAAATA CGCAGATGCG TGCACATAGG ACTGTTGTGT GTACAAGATC ATGCAAATGA TAGACCGAGC GTGTCAACCG TGATTTGGAT GCTTAACAGT GAAAATTCAA ACCTTCCCGA GCCAAAGCAA CCCGCATTTA TAGCTAGAAG GGGCTCTCCA GACGCTGAAT CACAAAGTGA CCAAAGAGCA TCCATCAACA ATGCGAGCTT CACAGAAATC ACTGGACGTT AA 
Length2502
Protein Sequence
Protein Residue
Map Locationscaffold_1: 4355500.. 4358511
Download Sequence
A.thaliana
AGI-codeAT1G11350.1
DescriptionS-domain-1 13
TAIR curator summary
Alias[CBRLK1][RKS2][SD1-13][CALMODULIN-BINDING RECEPTOR-LIKE PROTEIN KINASE][S-domain-1 13]
Gene coexpression
MR
MR Locus Description
7.2111 Ahg338119 Disease resistance protein (CC-NBS-LRR class) family
8.24621 Virus3631
18 Ahg479637 ZIM-like 1
24.0416 Ahg927077
26.9444 Ahg916368 Disease resistance protein (CC-NBS-LRR class) family
29.7993 Ahg896243
29.7993 Ahg896230
35.2704 Ahg922126 Protein of unknown function (DUF399 and DUF3411)
40.6571 Ahg336756
41.7493 Virus3865
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression