Detail



ID : Ahg911029

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|911029|Al_scaffold_0001_1283
Sequence
ATGGACGTTC ACGCCTTATC CTCTTCCGCT TCCGCCGCCG CAACCGCCGC ACCTGCGTCT TATATCGCCG GAAACTTCCC GTTGTTTCCT TCTAGTGTTA GATTGAGAAG AAACAAGGAT AATTTATTAG CTAAACAGAA GAAATTTGTA GTTTCTGCTT CGAAAAGAGA AGAGCCTAAG CTCAACGAAT GGGATCAAAT GGAGCTCAAG TTCGGACGTT TACTCGGAGA GGACCCGAAA TTGACTTTGG CTAAGATAGT GGGTAGAAAA GTGAATCCAG AAGCTTCTTT CGTTGAAATT GAGAAATCTT TCTACAAGAA CAAAGCCCCT GTTCCTAAAG ACGGAGTTAA CCTTGAAAAG CCAGTGATGA AAAAGCCAAA CCCTGTTTTG AAGAAGCCAT TGGAGGCTGC TGCTGTTCCA GTTGCTGCTC CAAAGGTGCA GAGATTGCCT AATGTTATAT TGAGAAAGCC GAGTTCGTTT TACGCGAGTA ATGACAACGA CGAGGAGTCT ATGTTGCGGT TGAAACCGAA TTTGACACTG AAAATGAGGA ATGAGAGGGA AAATGAGAGG TTTAGTGATA TGACATTGTT GAGAAAACGG GAGCCAGTGA GCGTAGAAGA CGAAAATGCT GAAGATAAGC CTCTTTCTGA TGATTTAACT ATGGAGGAAG GAGAACAAGA AGATGGAACA TATTCACAGT ATACTCTTTT GGAGAAGCCA GAAGCGAGGC TCGAGCCTAT CAATGTAGAA GAGGTAGTTG GAGATAGCGG AGCAGTGGAA TCATCAGAGA TAGAAAACAA CTCAATTCAG AAGCCAGAAG CAAGGCTCGA GCCTGTGAAT GTAGAAGAGG AAGTTGGAGA TAGCGGAGCT GCAGAATCAT CAGAGATAGA AAATAACTCT ATTCCAACTG AAATGCAGCT TAAAATCCAG AGGTCCTCGG GCTCCTCTGA GGAGAAAACC ATTAACAGTG ACTCACTTGA GAGGATTCCT TCGAAACCAG TTTCTCAAAC CATCGTAGAA GCTTCTTTAC AAGGGAAACC ACAAAGGTTA GACCCGTCTT CTGCCGAGCC ATCAGTTTCA ACCGAAAATG ATTGGAATAA GGCAGAGTCT CTAGTTAAGA CGGAATTACG GGCAGATGTT GAGCTAATAA GCTCGAGCAC TAGAGGCTTT GCTGTTTCCT ATGGATCTTT GATCGGATTT TTACCCTACC GGAACCTTGC AGCAAAATGG AAATTTCTCG CATTTGAATC ATGGTTACGA AGAAAAGGTG TAGATCCATC ATTGTATCGA CAAAACCTTG GGGTAATTGG AGGTCAAGAT GTCACGAGTA AAGCTCCATC TCCAGATTCA AGCTTAGATT CTGAAGACGC TACAACGATC AACGGAGAAG TTTCTTCTGA TATGAAGCTG GAAGATCTTC TTATGGTATA TGACAGAGAA AAGCAGAAGT TCCTGTCATC TTATGTTGGC CAGGAAGCTT ATATTTCGAT GAGGCCGAGA GAAAATGAAG AGGAAGTTGA GAAAAAACGA AATCTTATGG CTAAGCTTCG TGTTGGGGAT GTTGTGAAAT GCTGCATCAA GAAGATTACC TATTTCGGTA TATTCTGTGA GATTGTGGAA GCGAAAGTGC ACCAGCTGGA TTTTGCTCTT GAACGTATCT TCTTGTCGCT AAAAGAAATC ACGCCTGATC CACTAACCGA AGCCTTAGAA TCTGTAGTTG GTGGTGATAA TGATCAGTTC GGGGCACGGT TACAAGCAGC AGAGCTCGAC GCTGAGTGGC CTGATGTGGA ATCTCTGATC AAAGAGCTGG AAATGGTTGA AGGAATTCAA TCAGTTTCAA AAAGTCGTTT CTTCTTGAGC CCGGGTCTTG CTCCAACGTT TCAGGTTTAC ATGGCTCCAA TGTTTGAGAA CCAATACAAA CTGCTTGCTC GAGCTGGACA TAGAGTACAA GAGCTTATTG TTCAAGCTTA TGTCTTTATC TAA 
Length1983
Protein Sequence
Protein Residue
Map Locationscaffold_1: 4922255.. 4925457
Download Sequence
A.thaliana
AGI-codeAT1G12800.1
DescriptionNucleic acid-binding, OB-fold-like protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
12.6886 Ahg907920 plastid transcriptionally active 4
16.9411 Ahg482448 DnaJ/Hsp40 cysteine-rich domain superfamily protein
22.2486 Ahg928915 homogentisate prenyltransferase
28.9828 Ahg924584 chloroplast signal recognition particle 54 kDa subunit
30.3315 Ahg484805 Spc97 / Spc98 family of spindle pole body (SBP) component
30.5941 Ahg476914 thylakoidal ascorbate peroxidase
31.9374 Ahg951859 Alpha amylase family protein
35.8887 Ahg941526 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein
38 Ahg497488 eukaryotic translation initiation factor 2
39.6232 Ahg484328 Amidase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression