Detail


ID : Ahg911335

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|911335|Al_scaffold_0001_1589
Sequence
ATGAATGATT GCTTAAACGA GATTACTCGC GCTTTGCTCC AGTCCGATGT TTCTTTTCCC CTTGTGAAAG AGATGCAGAC CAATATTAAG AAGATCGTTA ACCTCGACGA TCTAGCAGCT GGCCACAACA AACGGCTGAT CATTGAGCAG GATGAAAGAC CTGTCTTTGC TCCCAAAAAG GCCAAACCTA GTAGTGTAGT TATGTTCGTC GGGTTACAAG GTGCTGGAAA AACCACAACA TGTACCAAGT ATGCTTACTA TCATCAGAAG AAAGGGTACA AAACAGCTCT AGTGTGTGCA GATACTTTCA GGGCCGGTGC TTTCGATCAG CTCAAACAGA ATGCCACCAA GGCTAAGATC CCCTTTTATG GAAGCTACAC AGAATCCGAT CCTGTGAAAA TTGCTGCTGA GGGAGTTGAT AGGTTCAAGA AAGAAAAATG TGATCTTATT ATTGTTGACA CCAGTGGTCG CCATAAACAA GAAGCTTCTC TCTTTGAAGA AATTCTTCAA GTTGCTGAAG CAACGGAACC AGATCTTGTT ATATTTGTTA TGGATAGCAG TATTGGTCAA GCTGCATTTG ATCAAGCTCA AGCATTTAAG CAAACTGTAT CTGTTGGAGC TGTTATTATT ACTAAGATGG ACGGCCATGC CAAGGGGGGT GGTGCTCTTA GCGCTGTAGC AGCTACAAAA AGTCCTGTGA TATTCATTGG AACAGGAGAG CATATGGATG AGTTTGAAGT GTTTGATGTC AAACCATTTG TCAGCCGTCT CTTAGGAAAG GGTGATTGGT CTGGACTCGT GAATAAACTA CAAGAGGTGG TACCTAAAGA TCTACAGCAT GAACTTGTAG AAAATCTCTC TCAGGGTAAC TTTACGTTGA GAACTATGTA CGACCAGTTC CAGTGTTCTC TGCAGATTCC TCTTAATCAG GTCAGAATCT CTTGTTCAAT AGTAGCCTGT ACCATTGCTG AATTGATGCC GAAAGGACAT GGTGACGAAA GCCGAGCGAA GAGATACATG ACAATGATGG ATTCTATGAC AGATAAAGAA CTGGACAGCT CAAACACAAA GGTGTTTAAC GAGTCAAGGA TAATGCGGAT AGCGAGAGGG TCAGGGAGGT TAGTAAGAGA AGTGATGGAG TTGTTGGAAG AGTACAAGAG GAAAGCAAAG ACTATGAAAG GAATCAAGAT CCCAAAGAAT GGAGACATGA GCAACAAGGT CATACCGCCT CAGATGCTAA AACAGATGGG CGGCATGAGC GGTCTGCAGA GTCTGATGAA GCAGATGGGT TCGGCTAAGG ACATGATGGG AATGTTTAGT GGCGGAGACA AGTAG
Length1335
Protein Sequence
Protein Residue
Map Locationscaffold_1: 6179645.. 6182376
Download Sequence
A.thaliana
AGI-codeAT1G15310.1
Descriptionsignal recognition particle 54 kDa subunit
TAIR curator summary54 kDa protein subunit of SRP that interacts with the signal peptide of secreted proteins
Alias[ATHSRP54A][SRP54-1][signal recognition particle 54 kDa subunit][SIGNAL RECOGNITION PARTICLE 54 KDA SUBUNIT]
Gene coexpression
MR
MR Locus Description
5.38516 Ahg475764 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
27.2213 Ahg495654 RNA-binding (RRM/RBD/RNP motifs) family protein
29.7993 Ahg470535 NAD(P)-binding Rossmann-fold superfamily protein
30.2655 Ahg322854 glucose-6-phosphate dehydrogenase 5
33.1662 Ahg483552 repressor of lrx1
39 Ahg484454 Tetratricopeptide repeat (TPR)-like superfamily protein
40.2492 Ahg485083 FTSH protease 7
49.6387 Ahg488676 novel cap-binding protein
52.5167 Ahg331439
75.9934 Ahg935376 protein N-terminal asparagine amidohydrolase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression