Detail



ID : Ahg484454

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|484454|fgenesh2_kg.5__446__AT3G26782.1
Sequence
GAATGAATGA AGGTTCCGAG TAAAAAAGCA CTGTTCTGTT CCGTCTCTCG TCTTCTCCAC ACGGAGAGAC ACACAGAGAG ACAAAACCTA ACGACTTTGT TCAACAGATA TGTCGACAAA ACAGATGTCT TCTCATGGAA CTCTGTCATC GCCGACCTCG CTCGTAGCGG TGATTCTGCT GAAGCTCTTC GAGCTTTTTC CTCAATGCGA AAACTCTCTC TATACCCAAC TCGCTCTAGC TTTCCTTGCG CCATTAAAGC ATGTTCGTCT CTTCTTGATA TCTTCTCCGG AAAACAGACC CATCAGCAAG CTTTTGTCTT CGGTTATCAA TCTGACATCT TTGTGTCTTC GGCTTTGATC GTTATGTATT CAACTTGTGG GCAACTTGAG GATGCACGGA AGGTGTTCGA CGAAATTCCC AAGAGAAATA TTGTTTCTTG GACTTCGATG ATTCGAGGGT ATGATCTTAA CGGTAACGCC CTTGATGCTG TTTCTCTATT TAAGGATTTA TTGATCGAAG AAAATGATGA TGACGCTACA ATGTTTCTTG ATTCTATGGG TATGGTTTCG GTAATCTCGG CTTGTTCTCG TGTTGCTGCT AAAGGTTTAA CTGCATCAAT TCATAGCTTT GTGATAAAAA GAGGGTTTGA TAGAGGAGTG AGTGTTGGTA ATACTCTTTT GGATGCTTAT GCTAAGGGCG GAGAAGGAGG TGTAGCTGTG GCGAGAAAAA TCTTTGATCA GATTGTGGAT AAGGATCGTG TTTCGTATAA TTCGATTATG AGTGTTTATG CTCAGAATGG GATGTCTAAT GAGGCTTTTG ATGTTTTTCG TAGACTGATT AAGGAGAAAG TTGTGACCTT TAACTCCATT ACATTGTCTA CTGTGTTGTT GGCAGTTTCG CATTCGGGTG CTCTCCGTAT TGGAAAGTGT ATACATGATC AGGTAATAAG GATGGGTCTT GAGGATGACG TGATAGTTGG GACATCGATA ATTGATATGT ATTGCAAATG TGGAAGAGTG GAGACGGCAA GATTAGCATT TGATCGAATG AAAAACAAGA ATGTTAGGTC GTGGACCGCC ATGATTGCTG GATATGGAAT GCATGGCCAT GCGGCTAAAG CGTTAGAGTT ATTCCCTGCT ATGATCGATT CAGGGGTTAG ACCAAATTAC ATTACTTTTG TATCGGTGTT AGCTGCTTGC AGTCACGCGG GTCTTCATGA TGTAGGCTGG CACTGGTTTA ACGCGATGAA GGGAAGATTC GGCGTGGAAC CGGGTTTAGA ACACTATGGT TGTATGGTTG ATCTTCTAGG TCGAGCTGGG TTTCTTCAGA AAGCTTATGA TTTGACTCAG AAAATGAAGA TGGAGCCGGA CTCTATCATC TGGAGCTCAC TTCTTGCAGC TTGTAGAATT CACAAGAACG TGGAGCTCGC TGAGATATCC GTGGCACGTT TGTTCGAATT GGATCCTTCG AACTGCGGTT ATTACATGCT GCTTTCGCAT ATTTACGCTG ATGCGGGGCG TTGGAAAGAT GTTGAGAGGG TGAGAATGAT AATGAAGAAT CGTGGATTGG TGAAACCCCC GGGTTTTAGC CTACTTGAGT TAAATGGTGA GGTTCATGTG TTCTTGATAG GAGACGAAGA GCATCCTCAA CGCGAGAAGA TTTACGAGTT TTTAGCAGAA CTGAACCGGA AGCTGTTAGA GGCAGGTTAC GTATCGAACA CGTCATCTGT ATGTCATGAT GTTGATGAGG AAGAGAAAGA GATGACACTG AGAGTTCACA GCGAGAAACT AGCGATTGCG TTTGGGATCA TGAACACGGT TCCTGGCTCG ACGGTTAACG TGGTTAAGAA TCTGAGAGTT TGCAGCGATT GTCATAATGT GATCAAGTTG ATTTCAAAGA TTGTTGATAG AGAGTTTGTG GTTAGAGATA CGAAGCGGTT TCACCATTTC AAAGATGGGT CTTGCTCTTG TGGCGATTAT TGGTGATTCG ATATTA 
Length1996
Protein Sequence
Protein Residue
Map Locationscaffold_5: 2915563.. 2917668
Download Sequence
A.thaliana
AGI-codeAT3G26782.1
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1.41421 Ahg472398 wound-responsive family protein
5.74456 Ahg470863 Tetratricopeptide repeat (TPR)-like superfamily protein
16.9115 Ahg927133 transcription coactivators
29.1204 Ahg943260 adenosine/AMP deaminase family protein
30 Ahg355947 Tetratricopeptide repeat (TPR)-like superfamily protein
32.249 Ahg495472 ribosomal protein L11 methyltransferase-related
35.7071 Ahg487474 SET domain protein 38
39 Ahg911335 signal recognition particle 54 kDa subunit
44.3621 Ahg471081 ATP phosphoribosyl transferase 2
45.7165 Ahg897788 Metal-dependent protein hydrolase
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression