Detail



ID : Ahg912745

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|912745|Al_scaffold_0001_2999
Sequence
ATGGGATTAA GCAGCTTAGC TTCTAGAACA ATTCGACCAG TTTCTCGTCT TCTTCATCAC CAGAACACTA GTTTCTTCCT CCGCACAATC GTCTCAAAAC CAGAGCTTCA ATCTCCGGAA ACCGCCGCTG TATCTCAGTC TGAGCCGACG CCGATTCTTC CTCCTAGGAA ACCTGTTGGT GGGGCACGTG TCCATTTCTC AAATCCTGAT GAGGCGATTG AGGTGTTCGT TGATGGGTTC GCGGTGAAAA TCCCAAAGGG TTTCACGGTT CTTCAGGCGT GTGAGGTCGC CGGAGTTGAT ATTCCGAGGT TTTGTTATCA TTCACGGTTG TCTATTGCTG GAAACTGTCG GATGTGTCTT GTTGAGGTTG AGAAGTCTCC TAAACCTGTG GCTTCGTGTG CCATGCCTGC ACTTCCTGGG ATGAAGATTA AGACTGACAC ACCAATAGCA AAGAAAGCGA GGGAGGGAGT GATGGAATTT CTGTTGATGA ACCATCCTTT GGATTGCCCA ATATGTGACC AAGGAGGAGA ATGTGATCTT CAGGATCAGT CTATGGCTTT TGGATCTGAC AGAGGCCGTT TCACTGAGAT GAAAAGATCT GTCGTTGATA AAAATCTCGG TCCTCTTGTG AAGACCGTTA TGACTCGGTG TATACAATGT ACAAGGTGTG TACGATTTGC CACAGAAGTT GCTGGGGTTC AGGATCTTGG CATTCTTGGT CGTGGTAGTG GAGAAGAAAT CGGAACTTAT GTCGAGAAAC TTATGACCAG TGAACTCTCT GGAAATGTCA TAGACATCTG TCCTGTGGGA GCTCTGACGT CAAAGCCCTT TGCCTTCAAA GCCAGAAACT GGGAGTTGAA AGGAACAGAA ACCATTGATG TTACTGATGC TGTTGGGTCC AACATCCGTG TTGATAGTAG AGGACCAGAG GTGATGCGTA TCCTTCCACG CCTTAATGAG GATATAAATG AAGAATGGAT TTCTGACAAA ACTCGATTCA GCTATGATGG CCTGAAAAGA CAAAGGCTGA GCGACCCTAT GATTCGAGAT GCGGATGGAC GATTCAAGGC AGTGAGCTGG CGTGATGCTT TGGCTGTTGT GGGTGATATT ATTCATCAGG TGAAGCCAAA TGAGATTGTT GGAATTGCAG GTCAACTATC TGATGCCGAA TCCATGATGG TATTGAAGGA CTTTGTGAAC AGAATGGGTT CAGACAATGT CTGGTGTGAA GGAACAGCTG TGGGCGTTGA TGCTGATCTT AGATACAGTT ATCTTATGAA CACTAGCATC GCTGGACTTG AGAATGCAGA TCTCTTCCTT CTTATTGGTA CCCAGCCTAG GGTTGAAGCT GCAATGGTGA ACGCTAGGAT CTGCAAGACA GTCCGTGCAT CAAATGCCAA GGTTGCATAC ATTGGTCCAC CTTCAGATTT CAACTACGAT TGCAAACACC TCGGAACTGG TCCTGATACC CTCAAGGAAA TTGCTGAGGG AAGTCACCCA TTCTGCTCAG CTCTCAAGAA CGCCAAAAAC CCTGCAATCA TTGTTGGTGC TGGGCTCTTT AACAGAACCG ATAAAGATGC AATCCTCTGT GCTGTTGAAT CCATTGCACA AGTCAACAAT GTTATCCGAC CAGACTGGAA TGGTCTCAAC TTTCTCCTTC TGTATGCTGC ACAAGCGGCT GCTCTTGATC TTGGCCTCAT TCAACAGTCT CCCAAAGCCC TCGAGTATGC AAAATTCGTC TACTTGATGG GATCAGACGA TGTAGATGTT GACAAGATCC CAAAAGACGC GTTTGTTGTC TACCAAGGAC ACCATGGAGA CAAAGCGGTT TATCGTGCAA ACGTGATTCT CCCTGCGACA GCCTTCACCG AGAAAGAAGG AACTTATGAA AACACCGAAG GATATACCCA ACAGACGGTT CCTGCTGTTC CAACAGTTGG CGATGCAAGA GACGACTGGA AGATTGTAAG AGCTTTATCC GAGGTCTCGG GTGTGAAGCT TCCATACAAC TCAATCGAAG GTGTCAGAAC AAGAATCAAG ACGGTTGCAC CAAACCTAGT CCACACAGAC GAGCGAGAGG CAGCTGCTTT TGGCCCTACC TTGAAGCCTG AGTCAAAGGA GACAATAGAC ACAATGCCTT TCAAACCCGT GGTCGAAAAT TTTTATATGA CAAACTCAAT CACAAGAGCC TCAAAGATCA TGGCTCAGTG CAGTGCTTTG CTTCTCAAGA AGTGA 
Length2235
Protein Sequence
Protein Residue
Map Locationscaffold_1: 12313836.. 12316919
Download Sequence
A.thaliana
AGI-codeAT5G37510.2
DescriptionNADH-ubiquinone dehydrogenase, mitochondrial, putative
TAIR curator summaryEncodes a subunit of the 400 kDa subcomplex of the mitochondrial NADH dehydrogenase (complex I). The protein has been isolated in the male gametophyte.
Alias[CI76][EMB1467][embryo defective 1467]
Gene coexpression
MR
MR Locus Description
2 Ahg946347 RNA helicase family protein
2 Ahg488313 Protein kinase superfamily protein
3.4641 Ahg477342
5.2915 Ahg341959 Octicosapeptide/Phox/Bem1p family protein
10.9087 Ahg945240 YGGT family protein
11.1803 Ahg484193 ammonium transporter 1;1
12.4097 Ahg897634 Ubiquitin carboxyl-terminal hydrolase-related protein
12.6491 Ahg946844 Topoisomerase II-associated protein PAT1
14.3178 Ahg487868 helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related
15.748 Ahg918742 transcription regulators
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression