Detail



ID : Ahg914606

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|914606|Al_scaffold_0001_4860
Sequence
ATGCAAGTGT TTCAAAGGAA AGAATCATCT TGGGGAAACT CAATAATGCC AACAAATTCA AATATTCAAG GATCTGAATC TTTTAGCTTG ACAAAGGATA TGATGATGTC TACAACACAA TTCCCCGGGA CGAAACATTC GGGTTTGCAG CTGCAAGATC AAGATTCAAC CTCAACACAA TCTACTGAAG AATCAGGCGG CGGGGAAGTT GCAAGCTTTG AAAAACATAA CCGTTATGGA TGCAGCATTG TGAATACCAA TCTCTCAGGT TACATCGAAA ACCCGGGAAA GCCTATTGAA AATTATACTA AGTCAACTAC TACCTCGTCG ATGGTGTCTC AAGATTCTGT GTTTCCTGCT CCTACTTCTG GTCAAATATC TTGGTCTCTT CAATGTGCTG AAACATCACA TTTCAATGGT TTCTTGGCTC CTGAATATAC ACCAGCACCA ACGGTGCTGC CACATTTAGA GATGATGGGT TTGGTTTCTT CAAGAGTGCC ATTGCCTCAT AACATTCAAG AGAATGAACC AATATTTGTC AATGCGAAAC AGTATCATGC GATTCTCCGT CGCAGGAAGC ACCGTGCTAA ACTCGAAGCT CAGAACAAAC TCATCAAATG CCGTAAACCG TACCTTCATG AGTCTCGCCA TCTTCATGCT TTAAAGAGAG CTAGAGGCTC CGGTGGACGT TTCCTCAATA CAAAGAAGCT TCAAGAATCA GCAAACTCAC TGTGTTCTTC TCAAATGGCA AATGGACAGA ATTTCTCTAT GAGCCCTCGC GGGGGTGGAA GCGGAATCGG GTCTAGTTCG ATCACACTGA GCTCCAATTC GAACCGTATC AACATGTTCC AAAACCCGCA GTTCAGCTTC TCAGGTTATC CGTCAACACA CCATGCCTCA GCTCTCATGT CAGGGACTTG A 
Length921
Protein Sequence
Protein Residue
Map Locationscaffold_1: 27518274.. 27519519
Download Sequence
A.thaliana
AGI-codeAT1G54160.1
Descriptionnuclear factor Y, subunit A5
TAIR curator summaryEncodes a member of the CCAAT-binding transcription factor (CBF-B/NF-YA) family. Expression is upregulated in response to ABA and drought. This regulation appears to be mediated by MIR169A which is downregulated in response to drought. NFYA5 is a target of MIR169A. Loss of function mutations are hypersensitive to drought.
Alias[NF-YA5][NFYA5]["nuclear factor Y, subunit A5"][NUCLEAR FACTOR Y A5]
Gene coexpression
MR
MR Locus Description
9.69536 Ahg311691 glyoxalase 2-4
15.2971 Ahg476423 Survival protein SurE-like phosphatase/nucleotidase
23.8118 Ahg476830 DNAJ heat shock N-terminal domain-containing protein
25.4951 Ahg920528 Galactose oxidase/kelch repeat superfamily protein
30.3809 Ahg474883 Dof-type zinc finger DNA-binding family protein
34.7994 Ahg476269 cellulase 3
40.2119 Ahg929581 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
42.2374 Ahg934369 Uncharacterised protein family (UPF0497)
43.4741 Ahg481074 RING/FYVE/PHD zinc finger superfamily protein
46.2817 Ahg930784 RNA polymerase Rpb6
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression