Detail



ID : Ahg476269

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|476269|fgenesh2_kg.2__1399__AT1G71380.1
Sequence
TCAAACCTCA AAAGCAATTA AGTTCTGTGT TTGGACAATG ACTTCTCCTT TCTTCTTTGT TTTCCTTTTC TCGTCTCTTC TCATAAGCAA TGTTGATGCC AACCCAAATT ACAAAGAAGC TCTCTCCAAG TCATTGCTTT TCTTCCAAGG TCAGCGATCC GGTCCTCTTC CTAGAGGCCA ACAACTCTCC TGGAGGGCTA GCTCCGGCCT TTCCGATGGC TCTGCTGCTC ATGTGGACTT AACCGGTGGG TACTATGACG CAGGAGACAA CGTCAAGTTC AATTTCCCAA TGGCGTTTAC AACCACAATG CTCTCATGGA GCGCACTGGA ATACGGTAAG CGGATGGGTC CTGAGCTGGA AAATGCACGA GTGAACATCC GTTGGGCCAC AGATTATCTG CTGAAATGTG CTAGAGCCAC TCCCGGAAAG CTTTATGTTG GGGTAGGAGA TCCTAATGTT GATCACAAAT GCTGGGAACG GCCTGAGGAC ATGGACACAC CTCGTACAGT TTACTCTGTA TCCCCTTCTA ACCCTGGTTC TGATGTCGCA GCTGAAACAG CAGCAGCTCT GGCTGCAGCG TCTATGGTTT TCAGGAAAGT TGATTCTAAG TATTCACGTT TGCTGCTCGC AACAGCTAAG AATGTGATGC AGTTTGCCAT TCAGTACAGG GGAGCTTACA GTGATTCCCT TTCTTCATCC GTCTGTCCTT TCTACTGCTC CTACTCTGGT TACAAGGACG AGCTGATGTG GGGTGCGTCC TGGCTGCTAA GAGCAACGAA TGACCCTTAT TACGCAAACT TCATAAAATC GTTAGGAGGT GGAGATCAGC CTGACATCTT CAGCTGGGAC AATAAATATG CTGGTGCCTA TGTTCTTCTG TCACGGAGAG CATTACTTAA CAAAGACAGC AACTTTGAAC AATACAAGCA AGCAGCTGAG AATTTCATCT GCAAAATCCT TCCAGATTCT CCTTCTTCCT CTACCCAATA CACTCAAGGA GGATTAATGT ACAAGTTACC TCAAAGCAAT CTTCAATACG TAACCTCCAT AACATTCTTG CTCACAACTT ATGCCAAATA CATGAAATCC ACAAAACACA CATTCAACTG CGGAAACTCC GTCATCGTCC CCAACGCCTT GATAAGCCTA TCGAAGCGAC AAGTCGATTA CATACTCGGA GAGAACCCAA TCAAAATGTC GTACATGGTT GGTTTCGGAT CCAATTTCCC TAAGAGAATC CACCACAGAG CATCTTCGCT TCCTTCACAC GCACTTCATT CCCATTCCTT AGGCTGCAAT GGCGGATTCC AATCATTCTA CACTCAAAAC CCTAACCCTA ACATTCTCAC AGGAGCAATC GTAGGAGGTC CAAATCAAAA CGATGGGTAT CCAGATCAGA GAGACGATTA CAGCCACGCA GAACCGGCGA CTTACATCAA CGCCGCATTC GTCGGACCTT TGGCGTACTT CGCCGCCGGT CGTTCGGCTT GAAATTGATT CCGCCACCGC CACCGCCAAT CTCCGATGTG TAGTTCCATT GTTAGTTAAA GATCCGTTGG CTTAAGCCTA ACGTGAAAAT CAGAAAAGGA AAAAGTTATT TTAATGTAAA ACTCTTAATG GGCTAAGACC CAATATTAAT GGACCCAGCA GAAATATTTC TCGTGGTCTT ATTTAATTCT 
Length1680
Protein Sequence
Protein Residue
Map Locationscaffold_2: 14039368.. 14041404
Download Sequence
A.thaliana
AGI-codeAT1G71380.1
Descriptioncellulase 3
TAIR curator summary
Alias[ATCEL3][ATGH9B3][CEL3][cellulase 3][ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9B3]
Gene coexpression
MR
MR Locus Description
2 Ahg935169 receptor like protein 29
17.7482 Ahg476654
32.619 Ahg489199 Protein of unknown function (DUF789)
34.7994 Ahg914606 nuclear factor Y, subunit A5
37.108 Ahg484101 CHASE domain containing histidine kinase protein
52.3355 Ahg477176 DROUGHT SENSITIVE 1
55.6417 Ahg950033 SPFH/Band 7/PHB domain-containing membrane-associated protein family
71.8401 Ahg483768 Fatty acid/sphingolipid desaturase
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression