Detail



ID : Ahg914608

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|914608|Al_scaffold_0001_4862
Sequence
ATGCTGACTT GTATAGCGTG CACGAAGCAG CTTAACACCA ACAATGGCGG ATCTACTCGA GAAGAAGATG AAGAAGACGG AGTCATTGGG ACTCCTAGGA CTAAGCAGGC GATTAAATCA CTGACGTCAC AGCTAAAAGA CATGGCAGTA AAAGCTTCAG GGGCATATAA AAACTGCAAA CCGTGTTCTG GGACATCAAA GCGGAATCAG AATCGAAACT ATGCTGATTC GGATGTTGCT TCGGATTCTG GGAGATTTCA TTATGCATAC CAGAGAGCTG GGACTGCAAG CTCAACTCCA AAGATTTGGG GGAATGATAT GGAGTCCAGG TTAAAAGGGC TTTCTAGTGA AGAAGGTACA CCTACTTCCA TGAGTGGCCG AACGGAATCC ATAGTGTTCA TGGAGGAGGA TGAGGCCAAG GAATGGGTTG CGCAAGTGGA GCCTGGTGTT CTCATCACAT TTGTGTCATT GCTTCAAGGA GGGAATGATC TAAAGAGAAT TCGGTTCAGT CGTGAGATGT TCAATAAATG GCAAGCTCAA AGATGGTGGG TGGAGAATTT CGAGAAGGTC ATGGAGTTAT ACAACGTGCA GCAGTTTAAT CAGCAGAGCG TGCCGCTTCC AACTCCTCCT GTATCTGAAC ATGGGGTCTC ACAAATACAG TCCGCGAAGG ACAGTCCTGT AACTCCACCT CTGGAAAGAG AGCGACCTCG CAGCAATATT CCAGGCTCTT CTGGTCTTGC TTCAACACCA AAGCTCTCTA GCATCAGCGG AACCAAGACT GAAACATCAT CAATCGATGG TTCTGCTAGA AGTAGCTCAG TAGATCGATC TGAGGAGGTC TCAGTGAGTA ACGCAAGCGA CATGGAAAGT GAATGGGTAG AACAAGATGA GCCTGGTATC TATATTACTA TCAGAGCTTT ACCAGATGGT AATCGCGAGC TTAGACGCGT TCGATTCAGC CGAGACAAGT TTGGGGAAAC ACAGGCGAGG TTGTGGTGGG AACAGAACAG AGCTCGGATA CAACAGCAAT ACTTGTGA 
Length1038
Protein Sequence
Protein Residue
Map Locationscaffold_1: 27530053.. 27532100
Download Sequence
A.thaliana
AGI-codeAT1G54180.1
DescriptionBREVIS RADIX-like 3
TAIR curator summaryBelongs to five-member BRX gene family. Arabidopsis BRX genes share high levels of similarity among each others, with several conserved domains. The most distinct is BRX domain - highly conserved in all BRX genes among distantly related species. This protein-protein interaction domain is required and sufficient for BRX activity.
Alias[ATBRXL3][BRX-LIKE3][ARABIDOPSIS THALIANA BREVIS RADIX-LIKE 3][BREVIS RADIX-like 3]
Gene coexpression
MR
MR Locus Description
14.4568 Ahg496535
34.9285 Ahg478268 Histone superfamily protein
45.5192 Ahg358424
52.2972 Ahg942208 alfin-like 4
74.5654 Ahg492399 GATA-type zinc finger protein with TIFY domain
77.1298 Ahg483001 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
83.006 Ahg919090 Tetratricopeptide repeat (TPR)-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression