Detail



ID : Ahg914738

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|914738|Al_scaffold_0001_4992
Sequence
ATGGAGACGG AAGAAGAGAT GAAGGAAAAT AGTATAAGCA TGGTGGAGGC AAAGTTGCCA CCGGGATTCA GATTTCACCC GAAGGACGAC GAGCTTGTGT GCGATTACTT GATGAAACGA TCGCTTCACA ATAATCCTCG ACCACCTCTC GTCTTGATCC AAGTCGACCT CAACAAGTGT GAGCCTTGGG ACATCCCAAA AATGGCATGC GTGGGAGGGA AGGATTGGTA TTTCTATAGC CAAAGAGACC GGAAATACGC GACGGGGCTG AGAACAAACC GAGCAACGGC CACTGGATAT TGGAAAGCTA CCGGCAAAGA CAGAGCCATT CTGAGAAAGG GTAAGCTTGT TGGGATGAGG AAGACATTGG TGTTCTATCA AGGTCGAGCT CCTCGAGGTC GTAAAACCGA TTGGGTCATG CACGAATTCC GTCTCCAAGG ATCTTATCAT CCTCCCAATC AGGAAGACTG GGTCTTGTGT AGGGTGTTCC ATAAGAATAC AGAAGGAGTT ATATGTAGAG ACAACATGGG AAGCTGTTTC GATGAGACAG CCTCCGCATC TCTTCCTCCA TTGATGGATC CTTACATCAA CTTTGACCAA GAACCCTCTT CTTACCTCAG TGATGATCAT CACTTCATCA TCAATGAGCA CGTACCCTGC TTCTCCAATT TGTCACAGAA CCAAACCTTA AACTCAAACC TAACCAACTC AGTCTCTGAA CTCAAGATTC CATGCAAGAA CCCTAACCCT TTGTTTACTG GTGGTTCAGC TCCAGCTACG CTCACAGGCC TCGACTCGTT CTGTTCTTCA GATCAGATGG TTCTCAGAGC TCTACTCAGT CAGCTCACTA AGATCGATGG AAGCCTCGGG GCTAACGAAT CACAGAGTTA TGGAGAAGGT AGCTCGGAGA GCCTGTTGAC CGACATTGGT ATTCCAAGCA GTGCTTGGAA TTGCTGA 
Length957
Protein Sequence
Protein Residue
Map Locationscaffold_1: 28120684.. 28172256
Download Sequence
A.thaliana
AGI-codeAT1G56010.2
DescriptionNAC domain containing protein 1
TAIR curator summaryEncodes a transcription factor involved in shoot apical meristem formation and auxin-mediated lateral root formation. The gene is thought not to be involved in stress responses (NaCl, auxins, ethylene). NAC1 (NAC1)
Alias[anac021][ANAC022][NAC1][Arabidopsis NAC domain containing protein 21][Arabidopsis NAC domain containing protein 22][NAC domain containing protein 1]
Gene coexpression
MR
MR Locus Description
3.4641 Ahg484673 NAC domain containing protein 3
12.7279 Ahg482040 Plant protein of unknown function (DUF828)
13.7113 Ahg919779 branched-chain amino acid transaminase 2
19.4936 Ahg344726
20 Ahg934176
21.4476 Ahg328437 Protein phosphatase 2C family protein
22.8473 Ahg483895 myb domain protein 2
23.0434 Ahg478996 NAC domain containing protein 3
24.3311 Ahg475889 sulfur E2
24.8193 Ahg919426
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression