Detail



ID : Ahg915004

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|915004|Al_scaffold_0001_5258
Sequence
ATGGAAGTGA AAGGAACTGG AACGGCTAAC ACGTGCCCAG ACAGTGTAAG CAAGAACGCG ACTCCTGAGT TCCAGAACAC CAAGCTCATG ACCCGTCTCA CCTACACCCT TGTCGAGATC GAAGGACCCT TTGAGGTTGC TTCAGACGGA AGCGTCAATT TCAAGGAAGA AGATGGAATC GATTGTGCTG CTGTGACAGT CCAGCTTCCA GGAGGTGAGT GTGTGCCATT ACTCTTTATA CTGTCAAACC CAAAGGGTCG TGGTGGATCC ACATGA 
Length276
Protein Sequence
Protein Residue
Map Locationscaffold_1: 31287533.. 31288069
Download Sequence
A.thaliana
AGI-codeAT5G66570.1
DescriptionPS II oxygen-evolving complex 1
TAIR curator summaryEncodes a protein which is an extrinsic subunit of photosystem II and which has been proposed to play a central role in stabilization of the catalytic manganese cluster. In Arabidopsis thaliana the PsbO proteins are encoded by two genes: psbO1 and psbO2. PsbO1 is the major isoform in the wild-type.
Alias[MSP-1][OE33][OEE1][OEE33][PSBO-1][PSBO1][MANGANESE-STABILIZING PROTEIN 1][OXYGEN EVOLVING COMPLEX 33 KILODALTON PROTEIN][33 KDA OXYGEN EVOLVING POLYPEPTIDE 1][OXYGEN EVOLVING ENHANCER PROTEIN 33][PS II OXYGEN-EVOLVING COMPLEX 1][PS II oxygen-evolving complex 1]
Gene coexpression
MR
MR Locus Description
5.2915 Ahg345468
6.16441 Ahg320535 F-box and associated interaction domains-containing protein
7.34847 Ahg935184 Pentatricopeptide repeat (PPR-like) superfamily protein
8.3666 Ahg932604
8.83176 Ahg949029
12.4097 Ahg938456 Plant self-incompatibility protein S1 family
17.7482 Ahg949959
19.2354 Ahg349578 F-box/RNI-like superfamily protein
20.1494 Virus1851
21.6333 Ahg907974
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression