Detail



ID : Ahg915044

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|915044|Al_scaffold_0009_13
Sequence
ATGGCTGCTT CATCTGTAAT CTCCTCCTCT ACCTTCCTCT GCAAATCATC ATCCTCCAAG AAGGATTTAG GGATTTCGTC GTTTCCTAAA TCTTCACAGA TTTCGATTCA TCGATGTCAG AAGAAATCGA TTGTTTCCGT TATGGCTCCG CAGAAGGATC GGTCTCCAGG CACTACAGGA TCGGTGAAAA CTGGGATGAC GATGACGGAG AAGATTTTAG CTAGAGCTTC TGAGAAGTCG TTAGTGGTTC CTGGTGATAA CATTTGGGTT AATGTTGATG TTCTTATGAC TCATGATGTT TGTGGCCCTG GTGCTTTTGG TATCTTCAAG AGAGAGTTTG GCGAAAAAGC TAAGGTTTGG GATCCGGAGA AGATTGTGGT GATTCCGGAT CACTATATTT TCACAGCCGA TAAGCGTGCG AACCGGAATG TTGACATCAT GCGGGAGCAT TGCAGGGAGC AGAACATTAA GTACTTTTAC GATATCACTG ACCTTGGAAA TTTTAAGGCT AATCCTGACT ACAAAGGTGT TTGCCATGTC GCACTTGCAC AAGAAGGTCA TTGCAGGCCA GGAGAGGTTT TGTTAGGAAC AGACTCTCAC ACTTGTACTG CTGGAGCATT TGGTCAATTT GCTACAGGGA TTGGAAACAC TGATGCAGGC TTTGTGTTAG GCACTGGAAA AATCCTCCTT AAGGTTCCAC CAACAATGAG GTTTATCTTG GATGGTGAAA TGCCCAGTTA TTTGCAAGCA AAGGATCTGA TTTTGCAAAT CATTGGTGAA ATATCTGTTG CTGGTGCAAC TTACAAGACG ATGGAGTTCA GTGGTACAAC TATCGAAAGT TTGAGTATGG AAGAAAGAAT GACATTGTGC AGCATGGTTG TGGAAGCTGG GGGAAAGAAT GGTGTCATCC CTCCTGATGC GACGACAATA AATTATGTTG AGAATAGGAC ATCTGTGCCA TTTGAGCCAG TTTATAGTGA TGGAAATGCA AGCTTTGTCG CAGATTATAG ATTTGACGTG TCAAAGCTGG AGCCTGTGGT GGCTAAGCCT CATTCTCCTG ACAACCGGGC TCTAGCAAGA GAATGCAAAG ATGTGAAAAT TGACAGAGTA TACATTGGTT CTTGTACTGG TGGGAAGACA GAGGACTTTA TGGCTGCAGC TAAACTTTTC CACGCAGCAG GAAGAAAGGT CAAAGTCCCA ACTTTCCTTG TCCCTGCTAC TCAGAAGGTG TGGATGGATG TGTACGCTCT CCCGGTGCCT GGATCAGGTG GAAAGACATG TGCGCAGATC TTTGAAGAAG CTGGCTGTGA CACTCCAGCC AGTCCTAGCT GTGGTGCTTG CCTTGGTGGC CCAGCAGACA CCTATGCTCG CTTGAATGAA CCTCAAGTGT GTGTCTCAAC GACGAACAGG AACTTCCCCG GTCGGATGGG ACACAAAGAA GGGCAGATTT ACTTAGCTTC TCCATACACC GCTGCAGCCT CTGCTTTAAC CGGTCATGTC GCTGACCCAA GGGAGTTCTT GCAGTAG 
Length1527
Protein Sequence
Protein Residue
Map Locationscaffold_9: 199231.. 203171
Download Sequence
A.thaliana
AGI-codeAT4G13430.1
Descriptionisopropyl malate isomerase large subunit 1
TAIR curator summaryEncodes methylthioalkylmalate isomerase.
Alias[ATLEUC1][IIL1][isopropyl malate isomerase large subunit 1]
Gene coexpression
MR
MR Locus Description
3.87298 Ahg929873 branched-chain aminotransferase4
4.12311 Ahg495519 HAL2-like
6.48074 Ahg941820 2-isopropylmalate synthase 2
6.85565 Ahg483355 general regulatory factor 9
7.34847 Ahg927551 aspartate kinase 3
7.48331 Ahg312617 cytochrome P450, family 79, subfamily F, polypeptide 2
8.48528 Ahg939859 sulfite reductase
8.83176 Ahg938383 Class I glutamine amidotransferase-like superfamily protein
9 Ahg495348 NADH-ubiquinone oxidoreductase-related
10.198 Ahg493537 cytochrome P450, family 83, subfamily A, polypeptide 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression