Detail



ID : Ahg312617

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|312617|fgenesh1_pm.C_scaffold_1001397
Sequence
ATGATGATGA TGATGAGCTT TAACACATCA TTTCAAATCA TACTAGTCTT TATCCTCTTC ATCGCATCAA TCACTTTACT AGGTCGAATA CTCTCAAGGC CCTCCAAAAC AAGAGACCGA TCTCGCCAGC TTCCTCCTGG GCCACCAGGA TGGCTCATCC TCGGCAATCT ACCCGAACTA ATCATGACTC GTCCTAGGTC GAAATATTTC CACCTTGCCA TGAAAGAGCT AAAAACAGAT ATTGCATGTT TCAATTTTGC CGGAACCCAC ACCATCACCA TAACCTCCGA CGAGATCACT AAAGAAGCGT TTAGAGAGAG AGACGCCGAT TTGGCAGACC GGCCTCAACT TTCCAGCATA GAGTCCATTG GAGACAATTA CAAATCAATG GGAACCTCCC CGTACGGTGA ACAATTCATG AAGATGAAAA AAGTGATTAC AACGGAAATT ATGTCCGTTA AAACGTTGAA CATGTTGGAA GCTGCAAGAA CCATCGAAGC TGATAATTTC ATTGCTTACA TTCACTCGAT GTATCAACGG TCGGAGACGG TCGACGTTAG AGAGCTCTCG AGGGTTTATG GTTACGCAGT GACCATGAGG ATGTTGTTTG GAAGGAGACA TGTCACGAAA GAAAACGTGT TTTCGGATGA TGGGAGACTA GGAAAAGCAG AAAAACATCA TCTTGAGGTG ATTTTCAACA CTCTAAACTG TTTGCCAAGT TTTAGTCCCG TGGATTACGT GGAAAGATGG TTGAGAGGTT GGAATATTGA TGGTCAAGAG GAGATGGCGA AAGTGAATGT TAATCTTGTT CGTAGTTACA ACAATCCCAT AATCGACGAG AGGATTGAAT TATGGAGGGA AAAAGGTGGT AAGGCTGCTG TTGAAGATTG GCTTGATACG TTCATTACGT TAAAAGATCA AAACGGAAAC TACTTGGTCA CGCCAGACGA AATCAAAGCT CAATGCGTTG AATTTTGTAT AGCAACGATC GATAATCCGG CAAATAACAT GGAGTGGACA CTTGCGGAAA TGTTAAAGAA CCCGGAGATT CTCAGAAAAG CTCTGAAAGA GTTAGAGGAA GTAGTTGGAA AAGACAGGCT TGTGCAAGAA TCTGACATAC CAAATCTAAA CTACTTAAAA GCTTGTTGCA GAGAAACATT CAGGATTCAC CCAAGCGCTC ATTATGTCCC TCCTCATGTG GCCCGTCAAG ATACCACCCT CGGGGGTTAT TTTATTCCCA AAGGTAGCCA CATTCATGTA TCCCGCCCTG GATTAGGCCG GAACCCTAAA ATATGGAAAG ATCCATTGGT ATATGAACCG GAGCGTCACC TCCAAGGAGA GGGAATCACA AAAGAGGTTA CTCTGGTGGA AACAGAGATG CGTTTTGTCT CGTTTAGCAC TGGTCGTCGT GGCTGCGTCG GTGTCAAAGT CGGGACAATT ATGATGGTTA TGATGTTGGC TAGGTTTCTT CAAGGGTTTA ACTGGAAACT CTACCAAGGT TGTGGACCGC TAAGCCTCGA GGAAGATGAT GCATCATTGC TGATGGCTAA GCCTCTTCTT TTGTCCGTTG AGCCACGCTT GGCACCAAAC CTTTATCCAA AATTCCGCCC TTAA 
Length1614
Protein Sequence
Protein Residue
Map Locationscaffold_1: 6555116.. 6563763
Download Sequence
A.thaliana
AGI-codeAT1G16400.1
Descriptioncytochrome P450, family 79, subfamily F, polypeptide 2
TAIR curator summaryEncodes cytochrome P450 CYP79F2.
Alias[CYP79F2]["cytochrome P450, family 79, subfamily F, polypeptide 2"]
Gene coexpression
MR
MR Locus Description
1.41421 Ahg941820 2-isopropylmalate synthase 2
2.82843 Ahg929873 branched-chain aminotransferase4
3.87298 Ahg920545 cytochrome p450 79f1
4.24264 Ahg927551 aspartate kinase 3
4.47214 Ahg326599 2-isopropylmalate synthase 2
5.19615 Ahg483411 isopropylmalate isomerase 2
5.65685 Ahg493537 cytochrome P450, family 83, subfamily A, polypeptide 1
5.91608 Ahg941819 methylthioalkylmalate synthase 1
6 Ahg488253 isopropylmalate dehydrogenase 1
6.48074 Ahg950898 myb domain protein 28
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression