Detail



ID : Ahg915481

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|915481|Al_scaffold_0008_232
Sequence
ATGGATCTGA GTTCTGACTC TACTCTCAAT AAGATTAACT TCATCGCTCG CTTGATTTCG AAACCCAATT CCGGTGACCT AGATTTTGAT TTTGATTCTT GCTATGATCA TGATTATGAT CTGAGTTCTA GAGACAGAGG ATCACCTTCT TCTTCGTCGT CGTTACCTGG AATAGATAAG TATAACGAAA AGGTGAAGAA TCAGATACAA GCACTTGTTC GTGTTATTAA GGTTGCTCGC ACCTATAGAG ATGACAATGT CCCTTCTCTA ATCGAAGAGG TTATTACTAC TACTACTCAC AGGTCTTTAT CTTTGAGTAG AGGATCTGGA TTTGTCGCAT TTTCAACTCC TGAGGAAGCA TCTAGAGCTA TTACAGAGAT GAATGGAAAA ATGATCGTTA CCAAACCTCT ATATGTTGCT CTTGCGCAGC GGAAAGAAGA CTGCAAAGCT AGGTTACAGA TGAGGCCGGT CAATATGCCA CCTGCGGTTG GTCCTAGGAT GCAAATGTAT CCACCAGGTG GTCCACCAAT GGGTCAGCAA CTCTTCTATG GTCAAGGACC TCCTGCTATG ATTCCTCCTC AGCCTGGATT CGGATATCAA CAACAGCTTG TACCCGGTAT GAGACCTGGT GGGTCTCCAA TGCCAAACTT CTTCATGCCT ATGATGCAAC AAGGCCAACA ACAACAACAG CAGCAACAGC AGCAGCAGCA GCAGTATGGT GGTGGTGTGC ATCATCGTGA CTCGCCTGCT TCTCAATCTG TTCCTATTGG AGCTTTGGCT ACACAACTTG CAAATGCAGC TCCAGAGCAA CAGAGAACGA TGCTTGGTGA GAATCTATAC CCGCTTGTGG AGCAGCTGGA GCCAGAATCC GCAGCTAAAG TCACGGGAAT GCTTCTTGAA ATGGACCAAA CCGAAGTACT TCACTTGCTG GAATCACCAG AGGCACTTAA AGCTAAAGTT ACAGAAGCAA TGGATGTTCT GAGGAGTGTA GCACAGCAGC AAGTGGTGGT GCAGCTGATC AGTTAG 
Length1026
Protein Sequence
Protein Residue
Map Locationscaffold_8: 1238271.. 1240048
Download Sequence
A.thaliana
AGI-codeAT1G49760.1
Descriptionpoly(A) binding protein 8
TAIR curator summarypolyadenylate-binding protein, putative / PABP, putative, similar to poly(A)-binding protein GB:AAF66825 GI:7673359 from (Nicotiana tabacum). Highly and ubiquitously expressed. Member of the class II PABP family.
Alias[PAB8][PABP8][poly(A) binding protein 8][POLY(A) BINDING PROTEIN 8]
Gene coexpression
MR
MR Locus Description
26.6271 Ahg496177 GTP binding Elongation factor Tu family protein
34.176 Ahg486792 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein
47.8435 Ahg473757 ribosomal protein 1
50.1498 Ahg930609 Ribosomal protein L13 family protein
50.5964 Ahg487065 Ribosomal protein L4/L1 family
57.7841 Ahg472587 Ribosomal protein L18e/L15 superfamily protein
66.8805 Ahg484625 60S acidic ribosomal protein family
66.8805 Ahg497404 60S acidic ribosomal protein family
69.3253 Ahg478235 Ribosomal protein L10 family protein
87.0632 Ahg926602 40s ribosomal protein SA
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression