Detail



ID : Ahg473757

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|473757|fgenesh2_kg.1__3711__AT1G43170.1
Sequence
AAACTAGGGT TTTAAAGATC ATTTCTCTCT TGCAGTCCCA TCGTTGGAGC TTAGAAGCCG TCGGCACAAG TAGAAGAAGA AGAAGAATGT CTCACAGGAA GTTTGAGCAC CCAAGACATG GTTCTCTTGG TTTCCTTCCA AGGAAGAGAG CTAACCGTCA CAGAGGAAAG GTGAAGGCTT TCCCTAAGGA TGACCAAACC AAGCCTTGCA AGTTCACAGC TTTCATGGGT TACAAAGCTG GTATGACTCA CATTGTCAGA GAAGTCGAGA AACCTGGATC TAAGCTTCAC AAGAAGGAGA CATGTGAGGC TGTTACCATC ATTGAGACAC CTGCTATGGT TGTTGTTGGA GTTGTTGCCT ATGTGAAGAC TCCGAGAGGT TTGAGGTCTT TGAACACTGT TTGGGCACAG CATTTGAGTG AGGAGGTTAG GAGAAGGTTC TACAAGAACT GGGCTAAGTC TAAGAAGAAG GCTTTCACTG GGTACGCTAA GCAGTATGAA AGTGAGGAGG GCAAGAAGGG TATTCAGGCT CAGCTTGAGA AGATGAAGAA ATACGCAACT GTTATCCGTG TTTTGGCCCA CACTCAGATC AGGAAGATGA AGGGATTGAA GCAGAAGAAG GCTCACATGA TGGAGATCCA GATCAATGGT GGTACCATTG CCCAGAAGGT CGACTTTGCC TACAGCTTCT TTGAGAAGCA GATCCCAATT GAAGCTGTCT TCCAGAAGGA TGAAATGATT GATATCATTG GTGTGACCAA GGGTAAGGGT TACGAAGGTG TTGTTACCCG TTGGGGTGTT ACCCGTCTTC CTCGTAAGAC TCACAGGGGT CTGCGTAAGG TTGCTTGTAT CGGTGCGTGG CATCCTGCTA GAGTGTCTTA CACTGTTGCT AGGGCTGGTC AGAATGGTTA CCATCACCGT ACTGAGCTGA ACAAGAAGAT TTACAGGTTG GGCAAGGTTG GTACTGAGGC ACATTCAGCC ATGACTGAAT ATGACAGGAC TGAGAAGGAT GTGACTCCAA TGGGAGGATT CCCACACTAC GGTGTGGTGA AGGATGATTA CTTGATGATT AAGGGGTGCT GTGTTGGTCC CAAGAAGAGA GTTGTAACTC TCAGACAGTC ACTACTCACC CAGACTTCCC GTCTTGCCTT GGAGGAGATC AAACTCAAGT TCATTGACAC CGCCTCCAAT GGGGGACATG GTCGCTTCCA GACCACCCTG GAGAAGATGA GGTTTTACGG TCGTACCAAG AATTAAGAGT TGTTTTATCG CAATTCTTCT TAGAAAGTTT TATGTTTTGG TTATCTGTTG CTACTTGTCT CAGAGAGATG TTATCCTTAA AACAATGCTA TGCAGTTTTC TTTTGTTTTA GTTTGTTACA TTTTTGGAAG ACAAATGATT TGCTTCTCAA GTTTTGTGAC TTTTGATGTG TTTATCATTT ATGAAAA 
Length1447
Protein Sequence
Protein Residue
Map Locationscaffold_1: 20905053.. 20907118
Download Sequence
A.thaliana
AGI-codeAT1G43170.1
Descriptionribosomal protein 1
TAIR curator summaryEncodes a cytoplasmic ribosomal protein.
Alias[ARP1][emb2207][RP1][RPL3A][ribosomal protein 1][embryo defective 2207]
Gene coexpression
MR
MR Locus Description
1 Ahg496177 GTP binding Elongation factor Tu family protein
2.23607 Ahg490690 Ribosomal protein S25 family protein
2.82843 Ahg941581 Ribosomal protein S8e family protein
3 Ahg926602 40s ribosomal protein SA
3.4641 Ahg487529 Ribosomal protein S4 (RPS4A) family protein
3.4641 Ahg906639 Ribosomal protein L2 family
3.4641 Ahg487065 Ribosomal protein L4/L1 family
4 Ahg481708 chaperonin-60alpha
4.58258 Ahg477755 Ribosomal protein S3Ae
4.69042 Ahg930609 Ribosomal protein L13 family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression