| Annotation |
|---|
| Description | jgi|Araly1|915663|Al_scaffold_0008_414 |
| Sequence |
ATGGCCGATA GTGAGCAATT GGTCTGCATC AGCTGCGTAT CTGAGGTACG GTACTCTTTC GTGAGCCACC TCTCCGAAGC TCTCCGCCGG AAAGGCATAA GTAGTGTGAT CATAGATGTA GATAGCGATG ATCTGCTTTC CAAGGAGTCG CAGGCAAAGA TCGAGATATC TAGGGTTTCT GTGATGGTTT TATCCAGAAT CTGTGAGCCA ACTAGAGTAT GCCAAAACTT CGTGAATGTT ATCGAGTGCC AGAGGAACAA GAACCAGGTG GTGGTTCCGG TGTTGTACGG TGATAGTCCA TTACAGGGCG AATGGCTCAG CGTGCTGGAT TTGAGAGATT TATCTCCAGT TCACCAATCC AGGAAGGACT GTAGTGACTC CCAATTTGTA AAAGAGATTG TCAAAGATGT GTATGAGAAG CTCTTTTATA TGGAACGGAT TGGAATCTAT TCAAAGCTGC TGGAGATTGA GAAAATGGTT TGCAAGCAAC CGTTGGGCAT CCGTTGTGTT GGAATTTGGG GTATGCCTGG CATAGGCAAG ACGACACTTG CTAAAGCGGT CTTTGACCAA ATGTCTGGCG AATTTGATGC TTCTTGTTTT ATCGAAGACT ATAGCAAAGC TATTCAAGAG AAGGGTGTTT ATTGTTTGCT GGAGGAACAG TTTTTGAAAG AAAATGCTGG TGGTGCTGGT GGTACCGTTA CGAAACTGAG CTTGCTTAGA AACAAATTAA ACAATCAGAG GGTTCTTGTT GTTCTTGATG ATGTGCGCAG TCCTCTGGTT GTGGAGTCTT TTCTTGGAGG GTTTGACTGG TTTGGTCCCA AAAGCCTAAT CATCATAACC TCTAGAGATA AACAGGTGTT TCGCCTTTGT CGAGTCGATC AAATATATGA GGTTCTGGGT TTAAATGAGA AAGAGGCTCT TCAGCTCTTC TCTTTTTGTG CGTCTATAGA CGATATGGCA GAGCAGAGTC TCCATGAGGT GTCAATGAAA GTGGTTAAGT ATGCGAGTGG ACATCCATTA GCTCTCAGTC TCTATGGCAG AGAGCTGAAG GGTAAAAAAA CACTGCCAGA AATGGAGACA ACATTCCTCG AACTCAAGGA ACATCCTCCA ACTATGTTTG TTGATGCAAT CAAGAGCTGC TATGACACAC TCAATGACAG GGAAAAAAAC ATTTTCTTGG ACATAGCTTG TTTCTTTGAG GGAGAAAATG TCGACTACGT GATGCAACTG CTTGAGGGTT GTGGTTTCTT TCCACATGTT GGAATTGATG TTCTTGTCGA GAAGTGTCTG GTGACTATTA CAGAAAACCA AGTGCGGATG CATAACTTGA TCCAAAATGT TGGCCGACAA ATAATAAATA GAGAAACAAG ACAGACTAAG AGGCGCGACA GACTGTGGGA ACCTTGGAGC ATCAAATATT TATTAGAAGA TAACGGAGAA AAAGAAAATG GAGAACACAA AACAACTTTG GAACGTGCTC AGGGCCCTGA AGAGATCGAA GGCATGTTTC TGGACACATC AAACTTTAGT TTTGATATTA AGCCTGCTGC CTTTGATAAT ATGTTGAACC TTAGATTGCT CAAGATTTAC AGTTCCAATC CTGAAGTCCA TCATGTAAAG AATTTCCTCA AAGGCTCTCT CAATTCTCTT CCTAATGAGC TAAGACTCCT CCATTGGGAG AACTATCCTC TGCAGTTTCT GCCCCAAAAT TTTGATCCTA TACACCTTGT TGAAATCAAC ATGCCGTACA GCCAACTTAA GAAACTTTGG GGTGGAACCA AGAACCTGGA GATGTTGAAA ACTATCAGGC TTTGTCATTC CCAGCAACTA GTTGATATTG ACGATGTTTT AAAAGCTCAA AATCTTGAGG TAATTGATCT CCAAGGTTGT ACAAGACTGC AGAGTTTCCC AGCCACAGGT CAATTGCTAC ATCTACGAAC TGTAAATCTC TCTGGTTGCA CAGAGATCAA AAGTTTCCCA GAGATTCCCC CAAATATTGA GACACTGAAT CTACAGGGGA CTGGTATAAT AGAATTACCA CTTTCCATTA TTAAGCCAAA CTACACAGAG CTTTTGAATC TTCTAGCTGA AATCCCGGGT CTTTCAGGAG TCTCAAACCT TGAGCAAAGT GATCTCAAAC CTTTAACAAG CCTGATGAAA ATGAGCACAT CTAATCAAAA TCTTGGCAAG CTTATTTGCT TGGAGCTGAA AGATTGTGCT CGTTTGCGAA GTCTGCCAAA CATGAATAAT TTAGAACTTC TCAAAGTTCT TGATCTTTCT GGTTGCTCAG AGCTCGAGAC TATCCAGGGT TTCCCACAGA ACCTGAAAGA GTTATATCTT GCTGGCACTG CAGTAAGACA AGTGCCACAA CTTCCTCAAA GCTTAGAACT CTTTAATGCA CATGGTTGTG TCTCTCTCAA GTCAATTCGC GTGGACTTCG AGAAGCTTCC TGTGCATTAC ACACTTAGTA ATTGTTTTGA TCTCTGTCCA AAAGTGGTCA GCGATTTTTT AGTGCAAGCG CTGGCTAATG CGAAACGCAT ACCAAGAGAG CATCAACAGG AACTCAACAA AACTTTGGCT TTCAGCTTCT GTGCGCCCTC ACATGCGAAT CAAAATTCCA AACTTGATCT GCAACTAGGA TCTTCTGTAA TGACACGACT AAATCCTTCT TGGAGGAACA CACTTGTGGG CTTTGCTATG CTGGTGGAAG TCGCATTTTC GGAGGATTAC TATGATGCTA CTGGTTTTGG CATTAGTTGT GTTTGCAGAT GGAAAAACAA GGAAGGCCAC TCTCATAGGA TAGAAAGAAA TTTGCATTGT TGGGCTCTAG GGAAAGCTGT TCAAAAGGAT CATATGTTTG TCTTCTGTGA TGACAACTTG CGTCCAAGTA CTGATGAAGG AATTGACCCC GATATCTGGG CTGATTTAGT TGTCTTTGAG TTCTTTCCTG TCAACAATCA GACAAGGCTT CTAGGTGATA GTTGCACAGT GACAAGATGT GGAGTCCGTG TAATAACTCC TCCAAACTGC AATACAAGTC TCGAGATATC ATCGTCAGTT TTGTCCTTAG ATCCGATGGA GGTTTCTGGT AATGAAGGTG AAGAAGTATT GAGAGTCAGT TATGATGGTT TACAGGAGAT AGATAAAGCT TTATTTCTTT ACTTAGCAGG TTTGTTCAAT GACGAGGATG TTGATTTGGT GGCACCACTT ATTGCTAACA GTATTGACAT GGACGTCAGT TATGGGCTCA AGGTCTTAGC CGATAGGTCT CTCATACGTG TATCTTCCAA TGGGGAAATA GTGATGTACA ATTTGCAACA AGAAATGGGT AAAGAAATCC TCCATACAGA ATCAAAGAAG ACTGACAGAT TGGTCGACAA TAGTCAGAGT TCCATGATCG ATTCAAAGGA AATCGAGATC ACTCATTCAA AGAATCGCCG AAAGAAGAGC AGGGCAAAGA AAGTGGTTCG CGTACTGGAT CCAGGCAGCC GGTCCAGTGA AGAAGTAGCT GACCTATGGG TTTGGCGAAA GTACGGTAAA AAACCCCTCA AAGGTTCTCC TTATCCAAGG AATTACTACA AATGTACCAG CTCGAAAGGT TGTTCAGCTA GGAAACAAAT CGAACGTAGC CGCACCGATC CAAACATGTT AGTCATTACT TACATCACTG AGCATAACCA TCCATCCCCC ACTCAACGCA ATGCTCTTGC CGGCTCCACT CATTCCCCGT CATCCTCCAA ATGCTCAGCT GTAACTACTT CTGACTCATG TAGAGTCTCC CAACACAAAG ACGAACCGGA TAAATCCCAT TTGCCTTCCT CTCCCGCTTC TCCTCCTTAT GCGGCCATGG TGATTAAGGA GGAGGACATG GAGCGACGGG ACAATATGGA GTTCGATGAT GACGTTGAAG ATACCTTCGT ACCGGAATTA TTTCCAGAGG ATATCTTTGC TGATCTGGAC AAGCTTGAGT CGAATTCTCA GACTATGTTT CTCGCTCACA GTAGCAGCGG AGGCAACATG GAAAACCAAG GGCGGAACTC TAGTGATGAT ATGGGGGTCA ATTTACCTAA TAAAACTCTG TGA |
| Length | 4083 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 2422800.. 2427691 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G45050.1 |
| Description | Disease resistance protein (TIR-NBS-LRR class) |
| TAIR curator summary | Encodes a member of WRKY Transcription Factor (Group II-e) that confers resistance to tobacco ringspot nepovirus. |
| Alias | [ATWRKY16][TTR1][WRKY16][TOLERANT TO TOBACCO RINGSPOT NEPOVIRUS 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 13.0767 |
Ahg496475 | |
| 13.4164 |
Ahg938635 | Ubiquitin-associated (UBA) protein |
| 13.8924 |
Ahg890756 | Pre-mRNA-processing-splicing factor |
| 16 |
Ahg357183 | |
| 17.8326 |
Ahg481108 | GRAM domain family protein |
| 21.3542 |
Ahg481149 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 21.4942 |
Ahg482966 | Cation efflux family protein |
| 23.4521 |
Ahg478100 | emp24/gp25L/p24 family/GOLD family protein |
| 24.8193 |
Ahg951254 | EXORDIUM like 2 |
| 25.8844 |
Ahg470153 | ORMDL family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|